Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm22021-201ENSMUST00000104353 107 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm13082-201ENSMUST00000118877 561 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm11262-201ENSMUST00000119326 833 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm14129-201ENSMUST00000122436 291 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm23760-201ENSMUST00000158350 116 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm15900-201ENSMUST00000161584 342 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm15796-201ENSMUST00000162135 204 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm7094-201ENSMUST00000178379 366 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Mir6960-201ENSMUST00000183449 61 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Mir6933-201ENSMUST00000184982 81 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm18505-201ENSMUST00000187360 790 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm37495-201ENSMUST00000194590 264 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm29793-201ENSMUST00000202874 460 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm18258-201ENSMUST00000210413 542 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm22508-201ENSMUST00000082772 110 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm25140-201ENSMUST00000083254 140 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm3616-201ENSMUST00000174430 2514 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm3683-201ENSMUST00000175701 2513 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm37195-201ENSMUST00000192006 3018 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Gm43266-201ENSMUST00000201049 1771 ntBASIC6.11□□□□□ -1.43
Chmp7Q8R1T1 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm2099-202ENSMUST00000223310 3341 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm11363-201ENSMUST00000121672 548 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm24477-201ENSMUST00000157438 103 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm25427-201ENSMUST00000157605 103 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm26490-201ENSMUST00000157879 140 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm22789-201ENSMUST00000157884 130 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm24944-201ENSMUST00000158330 128 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm16038-201ENSMUST00000159317 193 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm20656-201ENSMUST00000176925 518 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm22395-201ENSMUST00000177427 96 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm29045-201ENSMUST00000187278 698 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm43710-201ENSMUST00000199583 452 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm45173-201ENSMUST00000206819 305 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm29818-201ENSMUST00000218070 165 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 AC115289.1-201ENSMUST00000224915 522 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 AC126275.2-201ENSMUST00000225224 253 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm7195-201ENSMUST00000190869 1707 ntBASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Chmp7Q8R1T1 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Gm11251-201ENSMUST00000119593 2800 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Snord66-201ENSMUST00000104051 75 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Gm12190-201ENSMUST00000120001 187 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Gm13677-201ENSMUST00000120739 595 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Ear-ps12-201ENSMUST00000161720 451 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Gm37586-201ENSMUST00000193654 204 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Gm44474-201ENSMUST00000196525 127 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Gm44055-201ENSMUST00000204376 247 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 AL589742.1-201ENSMUST00000226034 349 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 AC158142.1-201ENSMUST00000226721 416 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Gm37096-201ENSMUST00000192317 2058 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Gm44535-201ENSMUST00000208889 3136 ntBASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Chmp7Q8R1T1 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC6.09□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms