Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm17711-201ENSMUST00000172028 237 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm6900-201ENSMUST00000178971 342 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm7182-201ENSMUST00000193351 732 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm42625-201ENSMUST00000198611 922 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm20074-201ENSMUST00000208144 484 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm45312-201ENSMUST00000210566 311 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm23407-201ENSMUST00000082538 91 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm24671-201ENSMUST00000104159 158 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm11576-201ENSMUST00000117433 417 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm14881-201ENSMUST00000120366 372 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Mir6408-201ENSMUST00000183643 91 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm28534-201ENSMUST00000187744 676 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm44403-201ENSMUST00000198554 129 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm43932-201ENSMUST00000204499 52 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm6842-201ENSMUST00000211361 390 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.17□□□□□ -1.9
Trub1Q8C0D0 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Mir673-201ENSMUST00000102361 91 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm15157-201ENSMUST00000121852 702 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm12693-201ENSMUST00000121965 483 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm13471-201ENSMUST00000122057 433 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm24314-201ENSMUST00000158274 123 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm27783-201ENSMUST00000183534 105 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm27733-201ENSMUST00000184803 68 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm19030-201ENSMUST00000194947 552 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm43746-201ENSMUST00000200028 317 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm7204-201ENSMUST00000062591 600 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm26129-201ENSMUST00000082719 107 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm22043-201ENSMUST00000082993 158 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.16□□□□□ -1.9
Trub1Q8C0D0 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Trub1Q8C0D0 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Trub1Q8C0D0 BC051076-202ENSMUST00000199477 2868 ntBASIC3.15□□□□□ -1.9
Trub1Q8C0D0 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Trub1Q8C0D0 Gm23256-201ENSMUST00000102235 110 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Gm26140-201ENSMUST00000103807 110 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Gm14971-201ENSMUST00000117980 663 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Gm15733-201ENSMUST00000132957 242 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Gm22908-201ENSMUST00000177620 110 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Gm26928-201ENSMUST00000182674 572 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Gm29259-201ENSMUST00000186396 694 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Gm28155-201ENSMUST00000191066 151 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Gm37828-201ENSMUST00000192496 432 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Gm38283-201ENSMUST00000193041 695 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.15□□□□□ -1.91
Trub1Q8C0D0 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms