Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm24275-201ENSMUST00000116780 146 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm11398-201ENSMUST00000120330 320 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm12876-201ENSMUST00000120975 408 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm13973-201ENSMUST00000121371 894 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm14972-201ENSMUST00000121780 364 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm25177-201ENSMUST00000122634 117 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm25292-201ENSMUST00000122797 322 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm26036-201ENSMUST00000158149 144 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm23583-201ENSMUST00000158533 289 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm24636-201ENSMUST00000158673 288 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm23824-201ENSMUST00000158741 276 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm16290-201ENSMUST00000161175 474 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm2343-201ENSMUST00000161177 1042 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm28412-201ENSMUST00000187243 177 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm28830-201ENSMUST00000188192 213 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Trbv8-201ENSMUST00000194020 285 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm43855-201ENSMUST00000197462 507 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm43039-201ENSMUST00000202883 963 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm44523-201ENSMUST00000205616 417 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm45508-201ENSMUST00000209298 299 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC5.9□□□□□ -1.46
Usp40Q8BWR4 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 AC174797.3-202ENSMUST00000224578 587 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 AC154506.1-201ENSMUST00000225178 621 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 AC137871.2-201ENSMUST00000226482 289 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Gm25401-201ENSMUST00000082975 106 ntBASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Usp40Q8BWR4 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Usp40Q8BWR4 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Usp40Q8BWR4 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.9□□□□□ -1.47
Usp40Q8BWR4 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Usp40Q8BWR4 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm12571-201ENSMUST00000118132 243 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm28058-201ENSMUST00000186421 264 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm10193-201ENSMUST00000188288 231 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Mir129b-201ENSMUST00000197461 65 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm43669-201ENSMUST00000198229 436 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm12582-201ENSMUST00000030555 697 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Gm336-201ENSMUST00000186376 1480 ntBASIC5.89□□□□□ -1.47
Usp40Q8BWR4 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm5757-201ENSMUST00000117494 528 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm12087-201ENSMUST00000121878 258 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm5924-201ENSMUST00000132554 871 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm37996-201ENSMUST00000191859 367 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm36891-201ENSMUST00000191995 655 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm43853-201ENSMUST00000197162 301 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm42621-201ENSMUST00000198114 275 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm35702-201ENSMUST00000198653 511 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm45387-201ENSMUST00000209792 632 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm7753-201ENSMUST00000221007 867 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms