Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm11446-201ENSMUST00000121319 866 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm23123-201ENSMUST00000157648 144 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm24727-201ENSMUST00000158231 144 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Mir6943-201ENSMUST00000185186 66 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm8296-201ENSMUST00000185597 524 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm43198-201ENSMUST00000200927 326 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm44076-201ENSMUST00000203072 520 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm6842-201ENSMUST00000211361 390 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm4052-201ENSMUST00000220890 451 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Olfr844-201ENSMUST00000054106 930 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm26165-201ENSMUST00000083791 138 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.85□□□□□ -1.79
Ccdc40Q8BI79 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm11367-201ENSMUST00000117802 120 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm12137-201ENSMUST00000119565 346 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm11600-201ENSMUST00000119592 240 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm7219-201ENSMUST00000119619 297 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm12383-201ENSMUST00000120628 760 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm11982-201ENSMUST00000121480 314 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm22204-201ENSMUST00000122654 327 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm22889-201ENSMUST00000158639 58 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm20811-201ENSMUST00000190500 553 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm43604-201ENSMUST00000199799 705 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm24950-201ENSMUST00000082768 191 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm23971-201ENSMUST00000083317 191 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm23849-201ENSMUST00000083833 191 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm26316-201ENSMUST00000083886 191 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.84□□□□□ -1.79
Ccdc40Q8BI79 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm12873-201ENSMUST00000119988 422 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm17655-201ENSMUST00000167969 255 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm26746-201ENSMUST00000181722 487 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Mir6401-201ENSMUST00000184499 109 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm27715-201ENSMUST00000184714 260 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm37828-201ENSMUST00000192496 432 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm44727-201ENSMUST00000204225 451 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm44266-201ENSMUST00000205235 500 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm18194-201ENSMUST00000210455 481 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm6929-201ENSMUST00000210930 468 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm18043-201ENSMUST00000216741 739 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm18363-201ENSMUST00000221671 730 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc40Q8BI79 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms