Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm12492-201ENSMUST00000117665 564 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Gm13717-201ENSMUST00000119868 365 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Gm24879-201ENSMUST00000158386 143 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Gm27959-201ENSMUST00000185172 111 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Gm29602-201ENSMUST00000186887 442 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Gm43804-201ENSMUST00000198280 456 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 AC138401.2-201ENSMUST00000220461 365 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Gm8744-201ENSMUST00000204475 3581 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Snora36b-201ENSMUST00000104383 132 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Mir7226-201ENSMUST00000184953 60 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Gm38166-201ENSMUST00000191660 471 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.53□□□□□ -2
Ttc28Q80XJ3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC2.53□□□□□ -2
Ttc28Q80XJ3 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Gm25938-201ENSMUST00000104139 166 ntBASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Gm12757-201ENSMUST00000119465 800 ntBASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Gm24675-201ENSMUST00000158757 259 ntBASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Mir5127-201ENSMUST00000175295 71 ntBASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Mir6386-201ENSMUST00000183558 104 ntBASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 AC132384.13-201ENSMUST00000219556 1159 ntBASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Gm37478-201ENSMUST00000193624 3495 ntBASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Gm9892-201ENSMUST00000182415 992 ntBASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Gm17989-201ENSMUST00000211543 412 ntBASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ttc28Q80XJ3 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm22947-201ENSMUST00000158559 91 ntBASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm25528-201ENSMUST00000180264 132 ntBASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm43512-201ENSMUST00000198495 176 ntBASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm45452-201ENSMUST00000210905 177 ntBASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm38269-201ENSMUST00000194549 3298 ntBASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm12387-201ENSMUST00000118573 955 ntBASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm12118-201ENSMUST00000119766 532 ntBASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm25360-201ENSMUST00000178786 191 ntBASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm29610-201ENSMUST00000187749 453 ntBASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Gm44016-201ENSMUST00000203463 164 ntBASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ttc28Q80XJ3 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Gm15103-201ENSMUST00000119893 871 ntBASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Gm15272-201ENSMUST00000120865 233 ntBASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Gm7855-201ENSMUST00000137737 687 ntBASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Gm8874-201ENSMUST00000196826 286 ntBASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Gm43276-201ENSMUST00000199712 364 ntBASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Gm19154-201ENSMUST00000223330 940 ntBASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Gm10025-201ENSMUST00000079568 372 ntBASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ttc28Q80XJ3 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms