Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm25563-201ENSMUST00000104603 74 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm11625-201ENSMUST00000119535 296 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm15177-201ENSMUST00000120491 577 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm15075-201ENSMUST00000122187 477 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm23118-201ENSMUST00000122657 187 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm25667-201ENSMUST00000157701 275 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm16545-201ENSMUST00000161968 463 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm26194-201ENSMUST00000175036 71 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm26988-201ENSMUST00000183296 945 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Mir6414-201ENSMUST00000183685 82 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm27457-201ENSMUST00000184771 156 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm28830-201ENSMUST00000188192 213 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm29184-201ENSMUST00000190038 334 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm42830-201ENSMUST00000196642 313 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm43954-201ENSMUST00000204634 544 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm44523-201ENSMUST00000205616 417 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm45200-201ENSMUST00000207434 919 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 AC134334.1-201ENSMUST00000214277 255 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Mir383-201ENSMUST00000083523 70 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm25008-201ENSMUST00000083809 81 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Ubfd1Q78JW9 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Synpr-207ENSMUST00000223583 3362 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm3940-201ENSMUST00000105087 432 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm15426-201ENSMUST00000117823 556 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm12571-201ENSMUST00000118132 243 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm14559-201ENSMUST00000121745 496 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm22211-201ENSMUST00000158097 156 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm9613-201ENSMUST00000171662 196 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm26983-201ENSMUST00000182051 388 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Mir6933-201ENSMUST00000184982 81 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm6680-201ENSMUST00000192789 950 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm43407-201ENSMUST00000199816 317 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm45434-201ENSMUST00000210550 293 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ubfd1Q78JW9 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms