Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm24689-201ENSMUST00000157760 104 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm25456-201ENSMUST00000157952 109 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm24343-201ENSMUST00000158708 111 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm8224-201ENSMUST00000166178 497 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Mir7093-201ENSMUST00000184195 101 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm28623-201ENSMUST00000187219 192 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm37692-201ENSMUST00000192633 232 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm38097-201ENSMUST00000192936 439 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm7182-201ENSMUST00000193351 732 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm8747-201ENSMUST00000195392 751 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm42542-201ENSMUST00000197978 268 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm43215-201ENSMUST00000199108 252 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm32536-201ENSMUST00000205209 445 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm45215-201ENSMUST00000206407 395 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm19126-201ENSMUST00000207896 509 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm45236-201ENSMUST00000208632 229 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 AC167192.2-201ENSMUST00000224794 198 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Clec2j-201ENSMUST00000032517 515 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.51□□□□□ -1.69
Rnf220Q6PDX6 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm24273-201ENSMUST00000102332 164 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm23577-201ENSMUST00000103950 110 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm24789-201ENSMUST00000104282 131 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm14197-201ENSMUST00000117480 1049 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm14220-201ENSMUST00000118114 449 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm15603-201ENSMUST00000119252 492 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm14695-201ENSMUST00000121721 282 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm4660-201ENSMUST00000131499 403 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm22059-201ENSMUST00000157544 104 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm24940-201ENSMUST00000158326 108 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm23028-201ENSMUST00000158773 265 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm15838-201ENSMUST00000161575 180 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm4842-201ENSMUST00000183237 835 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm27602-201ENSMUST00000183861 111 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Mir7087-201ENSMUST00000184840 70 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm28390-201ENSMUST00000185212 700 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm29610-201ENSMUST00000187749 453 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm10048-201ENSMUST00000194196 372 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm44076-201ENSMUST00000203072 520 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm44011-201ENSMUST00000203336 394 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 AC073947.3-201ENSMUST00000215576 766 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 AC157085.1-201ENSMUST00000216343 162 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 AC127242.4-201ENSMUST00000221242 470 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm9845-201ENSMUST00000056409 598 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Gm24763-201ENSMUST00000083688 190 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.5□□□□□ -1.69
Rnf220Q6PDX6 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.49□□□□□ -1.69
Rnf220Q6PDX6 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Rnf220Q6PDX6 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Rnf220Q6PDX6 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Rnf220Q6PDX6 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms