Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CtcfQ61164 Gm16303-201ENSMUST00000161498 390 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CtcfQ61164 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm18588-201ENSMUST00000177308 492 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm29563-201ENSMUST00000187249 496 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm37097-201ENSMUST00000193676 336 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm43370-201ENSMUST00000196437 284 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CtcfQ61164 Gm43884-201ENSMUST00000204251 559 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 AC153541.1-201ENSMUST00000213786 294 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm9628-201ENSMUST00000222169 725 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm18388-201ENSMUST00000222339 557 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 AC130823.2-201ENSMUST00000226169 290 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CtcfQ61164 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
CtcfQ61164 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CtcfQ61164 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CtcfQ61164 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CtcfQ61164 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CtcfQ61164 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CtcfQ61164 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CtcfQ61164 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm16082-201ENSMUST00000115992 377 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm15151-201ENSMUST00000117106 177 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm13640-201ENSMUST00000118445 264 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm9078-201ENSMUST00000119126 617 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm14688-201ENSMUST00000119169 303 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm12639-201ENSMUST00000121400 493 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm16412-201ENSMUST00000121602 273 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm14413-201ENSMUST00000122158 408 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm25965-201ENSMUST00000157170 93 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm10177-202ENSMUST00000161698 207 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm22398-201ENSMUST00000174941 125 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm25731-201ENSMUST00000175167 125 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm21960-201ENSMUST00000181924 452 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm5731-201ENSMUST00000190969 481 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm7182-201ENSMUST00000193351 732 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Ighv1-41-201ENSMUST00000194414 329 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm43367-201ENSMUST00000199986 625 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm44050-201ENSMUST00000204263 527 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CtcfQ61164 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm7407-201ENSMUST00000208301 568 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CtcfQ61164 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm8681-201ENSMUST00000219115 618 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm35558-202ENSMUST00000221819 499 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Gm2544-201ENSMUST00000222702 756 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CtcfQ61164 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm23452-201ENSMUST00000083327 107 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm42614-201ENSMUST00000198724 1554 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CtcfQ61164 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.38□□□□□ -1.71
CtcfQ61164 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.38□□□□□ -1.71
CtcfQ61164 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CtcfQ61164 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CtcfQ61164 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm23431-201ENSMUST00000104006 107 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm14816-201ENSMUST00000117174 294 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm14751-201ENSMUST00000117693 222 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm13064-201ENSMUST00000119125 557 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms