Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usf1Q61069 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.33□□□□□ -1.88
Usf1Q61069 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Usf1Q61069 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Usf1Q61069 Gm13664-201ENSMUST00000117304 345 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm13170-201ENSMUST00000119716 643 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm14577-201ENSMUST00000121134 256 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm13868-201ENSMUST00000122411 294 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm14903-201ENSMUST00000122435 537 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm25295-201ENSMUST00000122794 306 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.33□□□□□ -1.88
Usf1Q61069 Gm21960-201ENSMUST00000181924 452 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC3.33□□□□□ -1.88
Usf1Q61069 Gm27715-201ENSMUST00000184714 260 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm29104-201ENSMUST00000186304 222 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm44349-201ENSMUST00000197048 123 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm19418-201ENSMUST00000197436 580 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm42516-201ENSMUST00000198691 767 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm42526-201ENSMUST00000198956 393 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm45409-201ENSMUST00000211486 252 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usf1Q61069 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usf1Q61069 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usf1Q61069 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usf1Q61069 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Usf1Q61069 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Usf1Q61069 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usf1Q61069 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Usf1Q61069 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Usf1Q61069 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usf1Q61069 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Usf1Q61069 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Usf1Q61069 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usf1Q61069 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Usf1Q61069 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Usf1Q61069 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Usf1Q61069 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Usf1Q61069 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Usf1Q61069 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm12294-201ENSMUST00000119723 490 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Mup-ps15-201ENSMUST00000121741 539 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm24727-201ENSMUST00000158231 144 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.32□□□□□ -1.88
Usf1Q61069 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.32□□□□□ -1.88
Usf1Q61069 Gm17194-201ENSMUST00000164610 348 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.32□□□□□ -1.88
Usf1Q61069 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.32□□□□□ -1.88
Usf1Q61069 Mir6914-201ENSMUST00000184999 69 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm27538-201ENSMUST00000185065 294 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm28148-201ENSMUST00000186924 697 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.32□□□□□ -1.88
Usf1Q61069 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Usf1Q61069 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm43476-201ENSMUST00000197873 405 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm42976-201ENSMUST00000200313 222 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm9373-201ENSMUST00000208724 599 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm45860-201ENSMUST00000212700 334 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm5917-201ENSMUST00000217638 721 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Usf1Q61069 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Usf1Q61069 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Usf1Q61069 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.32□□□□□ -1.88
Usf1Q61069 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usf1Q61069 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Usf1Q61069 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Usf1Q61069 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Usf1Q61069 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Usf1Q61069 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm25407-201ENSMUST00000104102 134 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm26387-201ENSMUST00000104238 132 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Usf1Q61069 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm6429-201ENSMUST00000117144 475 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm13314-201ENSMUST00000118742 335 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm11881-201ENSMUST00000119408 572 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Usf1Q61069 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Usf1Q61069 Gm26088-201ENSMUST00000157896 131 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Gm16303-201ENSMUST00000161498 390 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usf1Q61069 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Usf1Q61069 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.31□□□□□ -1.88
Usf1Q61069 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Usf1Q61069 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms