Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Gm25377-201ENSMUST00000104334 129 ntBASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Gm43892-201ENSMUST00000204373 265 ntBASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 AC164297.4-201ENSMUST00000224225 1307 ntBASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Gm22651-201ENSMUST00000157872 94 ntBASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Gm25642-201ENSMUST00000175137 66 ntBASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Gm38330-201ENSMUST00000192743 959 ntBASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Gm38334-201ENSMUST00000195060 313 ntBASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Gm44844-201ENSMUST00000207242 336 ntBASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Diaph3-206ENSMUST00000226745 713 ntBASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ccdc88bQ4QRL3 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 Gm24664-201ENSMUST00000158939 100 ntBASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 Gm36985-201ENSMUST00000195595 379 ntBASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 Gm25820-202ENSMUST00000197479 128 ntBASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 Gm37664-201ENSMUST00000194607 3813 ntBASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Ccdc88bQ4QRL3 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Gm12739-201ENSMUST00000119769 382 ntBASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Gm16445-201ENSMUST00000120399 714 ntBASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Gm22852-201ENSMUST00000177899 101 ntBASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Gm29330-201ENSMUST00000190032 699 ntBASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Gm28098-201ENSMUST00000191361 699 ntBASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 AC069074.2-201ENSMUST00000217819 428 ntBASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 AC158979.1-201ENSMUST00000223594 2252 ntBASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Gm24274-201ENSMUST00000116787 124 ntBASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Gm15272-201ENSMUST00000120865 233 ntBASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Gm27648-201ENSMUST00000184315 107 ntBASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Gm19620-201ENSMUST00000195972 434 ntBASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 AC150560.3-201ENSMUST00000227442 455 ntBASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Gm9078-201ENSMUST00000119126 617 ntBASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Gm14333-201ENSMUST00000130484 264 ntBASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Gm27315-201ENSMUST00000183977 154 ntBASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Gm37433-201ENSMUST00000192695 678 ntBASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Gm37111-201ENSMUST00000193250 634 ntBASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Gm37441-201ENSMUST00000194430 678 ntBASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Gm17967-201ENSMUST00000195319 647 ntBASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Gm8074-201ENSMUST00000095071 252 ntBASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.82□□□□□ -1.64
Ccdc88bQ4QRL3 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms