Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm13268-201ENSMUST00000117485 433 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm13379-201ENSMUST00000118053 621 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm13087-201ENSMUST00000118298 256 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm14119-201ENSMUST00000119511 235 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm15387-201ENSMUST00000120421 648 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm14768-201ENSMUST00000122126 678 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm16558-201ENSMUST00000163015 532 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Snord92-201ENSMUST00000175548 85 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Mir6971-201ENSMUST00000183497 63 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm29598-201ENSMUST00000188996 588 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm37164-201ENSMUST00000192809 637 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm37288-201ENSMUST00000193963 334 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm43601-201ENSMUST00000196294 945 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm5552-201ENSMUST00000197149 515 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm29920-201ENSMUST00000206876 754 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 AC102352.1-201ENSMUST00000224187 582 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 AC132881.2-201ENSMUST00000225474 709 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm26121-201ENSMUST00000083364 162 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm5518-201ENSMUST00000084171 648 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm13122-201ENSMUST00000118380 453 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm14463-201ENSMUST00000121117 498 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm22208-201ENSMUST00000122658 110 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm6058-201ENSMUST00000154261 399 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm27308-201ENSMUST00000184807 233 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm38270-201ENSMUST00000192721 407 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm43214-201ENSMUST00000199242 352 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm4045-201ENSMUST00000204076 310 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm5322-201ENSMUST00000206142 699 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm18268-201ENSMUST00000208445 943 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 AC132112.1-201ENSMUST00000226354 505 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm23460-201ENSMUST00000083258 109 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Olfr713-201ENSMUST00000098139 975 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim40Q3UWA4 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm6913-201ENSMUST00000100019 348 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm5942-201ENSMUST00000120046 439 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm12691-201ENSMUST00000120186 456 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm25979-201ENSMUST00000157177 138 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm24289-201ENSMUST00000157629 135 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Gm23257-201ENSMUST00000158322 132 ntBASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim40Q3UWA4 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms