Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm9370-201ENSMUST00000222787 609 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm22043-201ENSMUST00000082993 158 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm11830-201ENSMUST00000120175 561 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Mir3473c-201ENSMUST00000175262 81 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm27580-201ENSMUST00000183666 149 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Mir7062-201ENSMUST00000185038 66 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm7634-201ENSMUST00000185778 553 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm29104-201ENSMUST00000186304 222 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm44349-201ENSMUST00000197048 123 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Upf3aQ3ULJ3 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
Upf3aQ3ULJ3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Upf3aQ3ULJ3 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm23747-201ENSMUST00000104228 131 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm6797-201ENSMUST00000119440 512 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm7308-201ENSMUST00000121087 447 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm11260-201ENSMUST00000121163 942 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm13419-201ENSMUST00000121711 271 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm29105-201ENSMUST00000187256 450 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm38332-201ENSMUST00000194189 147 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm38356-201ENSMUST00000194313 408 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 AC134254.4-201ENSMUST00000223086 370 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm23455-201ENSMUST00000083331 100 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Upf3aQ3ULJ3 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm15190-201ENSMUST00000120855 276 ntBASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Snord92-201ENSMUST00000175548 85 ntBASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm8600-201ENSMUST00000186320 905 ntBASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm28785-201ENSMUST00000187478 379 ntBASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm37219-201ENSMUST00000192036 926 ntBASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm4528-201ENSMUST00000207905 551 ntBASIC3.57□□□□□ -1.84
Upf3aQ3ULJ3 Gm44594-201ENSMUST00000208982 407 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms