Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm28655-201ENSMUST00000191538 692 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Trbv8-201ENSMUST00000194020 285 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm37709-201ENSMUST00000195074 600 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm42832-201ENSMUST00000196361 745 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm9379-201ENSMUST00000196790 646 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm7041-201ENSMUST00000201227 524 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm19726-201ENSMUST00000205008 240 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm44857-201ENSMUST00000208331 196 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm45367-201ENSMUST00000210171 347 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm45551-201ENSMUST00000211459 928 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm36247-201ENSMUST00000211834 285 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 AC113305.1-201ENSMUST00000214664 724 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm5176-202ENSMUST00000220267 583 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm2003-201ENSMUST00000118537 636 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm1989-201ENSMUST00000126244 636 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm4725-201ENSMUST00000151048 587 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm26933-201ENSMUST00000182320 827 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm27718-201ENSMUST00000183721 86 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm29038-201ENSMUST00000191543 678 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm36964-201ENSMUST00000191876 198 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm44387-201ENSMUST00000196298 145 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm42474-201ENSMUST00000201073 505 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm43039-201ENSMUST00000202883 963 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm44059-201ENSMUST00000204048 351 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm44611-201ENSMUST00000207507 355 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm45327-201ENSMUST00000211612 565 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 AC153646.1-201ENSMUST00000223229 1279 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm5265-201ENSMUST00000076828 342 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trafd1Q3UDK1 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm24987-201ENSMUST00000104453 134 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm15988-201ENSMUST00000118677 367 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm11704-201ENSMUST00000120031 214 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm12998-201ENSMUST00000122445 789 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm22817-201ENSMUST00000157448 356 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm23775-201ENSMUST00000158991 249 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm14527-201ENSMUST00000179300 639 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm22252-201ENSMUST00000179316 79 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm3933-201ENSMUST00000195391 439 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm45379-201ENSMUST00000211772 549 ntBASIC3.49□□□□□ -1.85
Trafd1Q3UDK1 Gm45696-201ENSMUST00000212088 985 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms