Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rnf40Q3U319 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm14868-201ENSMUST00000117840 216 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm16423-201ENSMUST00000120078 947 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm11623-201ENSMUST00000120176 1225 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm12482-201ENSMUST00000120435 630 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm11553-201ENSMUST00000120682 240 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm13903-201ENSMUST00000120945 193 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm15696-201ENSMUST00000121730 445 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm4912-201ENSMUST00000122212 1044 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm22345-201ENSMUST00000122644 107 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm25720-201ENSMUST00000157503 105 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm22384-201ENSMUST00000158187 104 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm28872-201ENSMUST00000191518 158 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm37692-201ENSMUST00000192633 232 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm37416-201ENSMUST00000193596 318 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm4525-201ENSMUST00000198831 254 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 AC166902.1-201ENSMUST00000216653 517 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm18188-201ENSMUST00000219386 478 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm25987-201ENSMUST00000083234 107 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Gm23041-201ENSMUST00000083868 106 ntBASIC6.08□□□□□ -1.44
Rnf40Q3U319 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rnf40Q3U319 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm22766-201ENSMUST00000158372 99 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm23855-201ENSMUST00000158377 135 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm26287-201ENSMUST00000158887 81 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm27299-201ENSMUST00000184593 103 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm28453-203ENSMUST00000187041 189 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm43427-201ENSMUST00000198188 331 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm43407-201ENSMUST00000199816 317 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm25203-202ENSMUST00000200458 216 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm23625-201ENSMUST00000082457 100 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm26456-201ENSMUST00000082831 111 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm25203-201ENSMUST00000082842 215 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm45555-201ENSMUST00000210028 2602 ntBASIC6.07□□□□□ -1.44
Rnf40Q3U319 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Rnf40Q3U319 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm27047-201ENSMUST00000183072 1819 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm43882-201ENSMUST00000204871 2264 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm38212-201ENSMUST00000194081 2756 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Mir701-201ENSMUST00000102208 109 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm14537-201ENSMUST00000117464 599 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm7312-201ENSMUST00000118798 469 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Snora47-201ENSMUST00000157483 138 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm22849-201ENSMUST00000157713 307 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm25550-201ENSMUST00000158079 128 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm24304-201ENSMUST00000177635 107 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm28023-201ENSMUST00000184556 60 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm27825-201ENSMUST00000184586 60 ntBASIC6.06□□□□□ -1.44
Rnf40Q3U319 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms