Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm23925-202ENSMUST00000188429 132 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm8708-201ENSMUST00000188500 906 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm37164-201ENSMUST00000192809 637 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm32308-201ENSMUST00000203053 280 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm44060-201ENSMUST00000204440 410 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm44779-201ENSMUST00000206937 708 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm7692-201ENSMUST00000213534 409 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 AC147240.1-201ENSMUST00000218767 431 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm8158-201ENSMUST00000219220 465 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm2436-201ENSMUST00000219562 774 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm8112-201ENSMUST00000219637 465 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm17915-201ENSMUST00000222077 548 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm23093-201ENSMUST00000083450 102 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm22155-201ENSMUST00000083836 162 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm12803-201ENSMUST00000118907 821 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm11822-201ENSMUST00000119177 415 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm9071-201ENSMUST00000165915 474 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm5558-201ENSMUST00000178933 495 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm24897-201ENSMUST00000179033 107 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm5527-201ENSMUST00000179821 642 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm8823-201ENSMUST00000193158 433 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm2522-201ENSMUST00000204280 322 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm4501-201ENSMUST00000207330 551 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm4558-201ENSMUST00000207886 521 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm4528-201ENSMUST00000207905 551 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm45530-201ENSMUST00000211658 225 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm21112-201ENSMUST00000212224 578 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm7760-201ENSMUST00000212265 578 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm7807-201ENSMUST00000212475 578 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm3442-201ENSMUST00000216808 710 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm29818-201ENSMUST00000218070 165 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm23302-201ENSMUST00000082710 100 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm25859-201ENSMUST00000083710 91 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Usp39Q3TIX9 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms