Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm25813-201ENSMUST00000082748 191 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm24950-201ENSMUST00000082768 191 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm23444-201ENSMUST00000082922 191 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm23971-201ENSMUST00000083317 191 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm22053-201ENSMUST00000083394 200 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm23849-201ENSMUST00000083833 191 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm26316-201ENSMUST00000083886 191 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Rnu2-10-201ENSMUST00000084010 191 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.96□□□□□ -1.46
Col9a1Q05722 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col9a1Q05722 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC5.96□□□□□ -1.46
Col9a1Q05722 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
Col9a1Q05722 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col9a1Q05722 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col9a1Q05722 Gm37790-201ENSMUST00000193136 3346 ntBASIC5.96□□□□□ -1.46
Col9a1Q05722 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col9a1Q05722 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm38070-201ENSMUST00000191850 6480 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Mir592-201ENSMUST00000102113 96 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm23651-201ENSMUST00000116755 120 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm13770-201ENSMUST00000117149 305 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm12427-201ENSMUST00000117719 302 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm13581-201ENSMUST00000120675 278 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Mir7014-201ENSMUST00000183853 63 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Mir8097-201ENSMUST00000185150 119 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm28344-201ENSMUST00000185704 279 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm29022-201ENSMUST00000190702 225 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm28552-201ENSMUST00000190725 388 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm37090-201ENSMUST00000195694 4105 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm7468-201ENSMUST00000203900 652 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm8667-201ENSMUST00000211112 449 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm39197-201ENSMUST00000212069 457 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 CT010449.1-201ENSMUST00000220624 153 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm10916-201ENSMUST00000080330 483 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm22826-201ENSMUST00000083774 165 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm10351-201ENSMUST00000087694 125 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col9a1Q05722 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col9a1Q05722 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col9a1Q05722 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Col9a1Q05722 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
Col9a1Q05722 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm43019-201ENSMUST00000196948 2863 ntBASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Col9a1Q05722 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.95□□□□□ -1.46
Col9a1Q05722 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col9a1Q05722 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col9a1Q05722 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col9a1Q05722 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Col9a1Q05722 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col9a1Q05722 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col9a1Q05722 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col9a1Q05722 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Col9a1Q05722 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm6134-201ENSMUST00000117265 171 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm14304-201ENSMUST00000117272 446 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm11822-201ENSMUST00000119177 415 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm14294-201ENSMUST00000119749 751 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm12308-201ENSMUST00000120440 389 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm11204-201ENSMUST00000122438 147 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm25621-201ENSMUST00000157223 114 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm25057-201ENSMUST00000157366 88 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm22769-201ENSMUST00000158367 98 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm23023-201ENSMUST00000158767 109 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC5.94□□□□□ -1.46
Col9a1Q05722 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm20534-201ENSMUST00000172957 172 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm26701-201ENSMUST00000181571 234 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm3841-201ENSMUST00000191399 451 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm42961-201ENSMUST00000202023 181 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms