Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Rfx1P48377 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Rfx1P48377 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.9□□□□□ -1.47
Rfx1P48377 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Rfx1P48377 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
Rfx1P48377 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx1P48377 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx1P48377 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
Rfx1P48377 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Rfx1P48377 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Rfx1P48377 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Rfx1P48377 Gm15231-201ENSMUST00000119174 447 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm11631-201ENSMUST00000119220 156 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm14919-201ENSMUST00000120839 390 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm11229-201ENSMUST00000121993 437 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm22479-201ENSMUST00000122566 81 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm24385-201ENSMUST00000122694 350 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx1P48377 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC5.89□□□□□ -1.47
Rfx1P48377 Gm24295-201ENSMUST00000158298 131 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm23852-201ENSMUST00000158376 77 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Mir3097-201ENSMUST00000175356 67 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm24713-201ENSMUST00000178850 107 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm25448-201ENSMUST00000180065 107 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx1P48377 Gm28683-201ENSMUST00000187134 615 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC5.89□□□□□ -1.47
Rfx1P48377 Gm28840-205ENSMUST00000189320 615 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm28835-203ENSMUST00000190062 615 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm42542-201ENSMUST00000197978 268 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm44261-201ENSMUST00000203337 209 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm35876-201ENSMUST00000205044 459 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx1P48377 Gm44720-201ENSMUST00000206076 260 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC5.89□□□□□ -1.47
Rfx1P48377 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.89□□□□□ -1.47
Rfx1P48377 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.89□□□□□ -1.47
Rfx1P48377 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.89□□□□□ -1.47
Rfx1P48377 AC154506.1-201ENSMUST00000225178 621 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 AC113031.5-201ENSMUST00000227116 606 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Snora44-201ENSMUST00000082670 129 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx1P48377 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Rfx1P48377 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Rfx1P48377 Gm15975-201ENSMUST00000122385 1402 ntBASIC5.89□□□□□ -1.47
Rfx1P48377 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Rfx1P48377 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Rfx1P48377 BC051076-202ENSMUST00000199477 2868 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Rfx1P48377 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Rfx1P48377 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm6134-201ENSMUST00000117265 171 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm12765-201ENSMUST00000117273 615 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm11490-201ENSMUST00000118128 272 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm11196-201ENSMUST00000119052 395 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm15803-201ENSMUST00000120118 394 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm12872-201ENSMUST00000121835 320 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm15022-201ENSMUST00000122074 746 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm12226-201ENSMUST00000144172 876 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm24857-201ENSMUST00000158061 310 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm25361-201ENSMUST00000179358 76 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm23003-201ENSMUST00000179948 107 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm23523-201ENSMUST00000180190 107 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm27541-201ENSMUST00000184078 122 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm7858-201ENSMUST00000190177 622 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm37882-201ENSMUST00000195254 196 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm3010-201ENSMUST00000198805 448 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.88□□□□□ -1.47
Rfx1P48377 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm44092-201ENSMUST00000204470 258 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.88□□□□□ -1.47
Rfx1P48377 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms