Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm11704-201ENSMUST00000120031 214 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Gm11829-201ENSMUST00000121003 282 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Gm15111-201ENSMUST00000122142 878 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Gm17038-201ENSMUST00000166586 494 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Spin2g-201ENSMUST00000178425 687 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
Traf1P39428 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Traf1P39428 Mir6385-201ENSMUST00000184295 105 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Gm28654-201ENSMUST00000189801 379 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Gm42896-201ENSMUST00000201249 1113 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Traf1P39428 AC156952.1-201ENSMUST00000220361 793 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Traf1P39428 AC124400.1-201ENSMUST00000225779 193 ntBASIC4.39□□□□□ -1.71
Traf1P39428 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Traf1P39428 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.39□□□□□ -1.71
Traf1P39428 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Traf1P39428 Gm25403-201ENSMUST00000082971 143 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Traf1P39428 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Traf1P39428 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Traf1P39428 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Traf1P39428 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Gm37965-201ENSMUST00000195304 1362 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Traf1P39428 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.39□□□□□ -1.71
Traf1P39428 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.38□□□□□ -1.71
Traf1P39428 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Traf1P39428 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Traf1P39428 Gm24581-201ENSMUST00000103962 133 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Gm24340-201ENSMUST00000104208 97 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Gm2348-201ENSMUST00000108782 300 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Mup-ps13-201ENSMUST00000120662 545 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Mup-ps1-201ENSMUST00000120720 544 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Gm12327-201ENSMUST00000121729 1168 ntBASIC4.38□□□□□ -1.71
Traf1P39428 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.38□□□□□ -1.71
Traf1P39428 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Traf1P39428 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.38□□□□□ -1.71
Traf1P39428 Mup-ps4-201ENSMUST00000151005 539 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.38□□□□□ -1.71
Traf1P39428 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Traf1P39428 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Traf1P39428 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Traf1P39428 Gm18505-201ENSMUST00000187360 790 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Gm28552-201ENSMUST00000190725 388 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.38□□□□□ -1.71
Traf1P39428 Gm37603-201ENSMUST00000192368 219 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Gm37001-201ENSMUST00000193377 190 ntBASIC4.38□□□□□ -1.71
Traf1P39428 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Traf1P39428 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Traf1P39428 Gm44954-201ENSMUST00000208513 227 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.38□□□□□ -1.71
Traf1P39428 Gm8681-201ENSMUST00000219115 618 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Gm8249-201ENSMUST00000219225 465 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Gm8274-201ENSMUST00000219820 463 ntBASIC4.38□□□□□ -1.71
Traf1P39428 AC159242.1-201ENSMUST00000225832 194 ntBASIC4.38□□□□□ -1.71
Traf1P39428 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.38□□□□□ -1.71
Traf1P39428 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Traf1P39428 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Traf1P39428 Gm10242-201ENSMUST00000090064 330 ntBASIC4.38□□□□□ -1.71
Traf1P39428 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Traf1P39428 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Traf1P39428 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Traf1P39428 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Traf1P39428 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Traf1P39428 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.37□□□□□ -1.71
Traf1P39428 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.37□□□□□ -1.71
Traf1P39428 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
Traf1P39428 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Traf1P39428 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Traf1P39428 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Traf1P39428 Gm12458-201ENSMUST00000119387 495 ntBASIC4.37□□□□□ -1.71
Traf1P39428 Gm16327-201ENSMUST00000137146 228 ntBASIC4.37□□□□□ -1.71
Traf1P39428 Gm23753-201ENSMUST00000157575 149 ntBASIC4.37□□□□□ -1.71
Traf1P39428 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Traf1P39428 Gm26365-201ENSMUST00000179177 94 ntBASIC4.37□□□□□ -1.71
Traf1P39428 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Traf1P39428 Mir6401-201ENSMUST00000184499 109 ntBASIC4.37□□□□□ -1.71
Traf1P39428 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC4.37□□□□□ -1.71
Traf1P39428 Gm28155-201ENSMUST00000191066 151 ntBASIC4.37□□□□□ -1.71
Traf1P39428 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC4.37□□□□□ -1.71
Traf1P39428 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC4.37□□□□□ -1.71
Traf1P39428 Gm43601-201ENSMUST00000196294 945 ntBASIC4.37□□□□□ -1.71
Traf1P39428 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC4.37□□□□□ -1.71
Traf1P39428 Gm43659-201ENSMUST00000200894 628 ntBASIC4.37□□□□□ -1.71
Traf1P39428 Gm42758-201ENSMUST00000202146 283 ntBASIC4.37□□□□□ -1.71
Traf1P39428 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.37□□□□□ -1.71
Traf1P39428 AC158631.2-201ENSMUST00000219999 478 ntBASIC4.37□□□□□ -1.71
Traf1P39428 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.37□□□□□ -1.71
Traf1P39428 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Traf1P39428 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms