Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm12936-201ENSMUST00000121439 301 ntBASIC5.52□□□□□ -1.53
RaraP11416 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RaraP11416 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.52□□□□□ -1.53
RaraP11416 Gm16358-201ENSMUST00000146046 210 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm26348-201ENSMUST00000157528 240 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm26490-201ENSMUST00000157879 140 ntBASIC5.52□□□□□ -1.53
RaraP11416 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RaraP11416 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Mir7008-201ENSMUST00000184398 63 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Gm6543-201ENSMUST00000197353 808 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm43215-201ENSMUST00000199108 252 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.52□□□□□ -1.53
RaraP11416 Gm43945-201ENSMUST00000203595 754 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm18011-201ENSMUST00000203717 565 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.52□□□□□ -1.53
RaraP11416 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC5.52□□□□□ -1.53
RaraP11416 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.52□□□□□ -1.53
RaraP11416 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.52□□□□□ -1.53
RaraP11416 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RaraP11416 Gm23412-201ENSMUST00000083017 107 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm26263-201ENSMUST00000083281 164 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.52□□□□□ -1.53
RaraP11416 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.52□□□□□ -1.53
RaraP11416 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.52□□□□□ -1.53
RaraP11416 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.51□□□□□ -1.53
RaraP11416 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.51□□□□□ -1.53
RaraP11416 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RaraP11416 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RaraP11416 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RaraP11416 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.51□□□□□ -1.53
RaraP11416 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 Gm12768-201ENSMUST00000120055 759 ntBASIC5.51□□□□□ -1.53
RaraP11416 Gm14577-201ENSMUST00000121134 256 ntBASIC5.51□□□□□ -1.53
RaraP11416 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 Gm26102-201ENSMUST00000157251 284 ntBASIC5.51□□□□□ -1.53
RaraP11416 Gm24780-201ENSMUST00000157635 143 ntBASIC5.51□□□□□ -1.53
RaraP11416 Gm23545-201ENSMUST00000158205 104 ntBASIC5.51□□□□□ -1.53
RaraP11416 Gm10784-201ENSMUST00000178715 238 ntBASIC5.51□□□□□ -1.53
RaraP11416 Gm29332-201ENSMUST00000190829 227 ntBASIC5.51□□□□□ -1.53
RaraP11416 Gm29813-201ENSMUST00000195856 447 ntBASIC5.51□□□□□ -1.53
RaraP11416 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.51□□□□□ -1.53
RaraP11416 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.51□□□□□ -1.53
RaraP11416 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RaraP11416 Gm44779-201ENSMUST00000206937 708 ntBASIC5.51□□□□□ -1.53
RaraP11416 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.51□□□□□ -1.53
RaraP11416 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RaraP11416 Gm25134-201ENSMUST00000082646 160 ntBASIC5.51□□□□□ -1.53
RaraP11416 Gm23678-201ENSMUST00000083157 107 ntBASIC5.51□□□□□ -1.53
RaraP11416 Gm23461-201ENSMUST00000083265 107 ntBASIC5.51□□□□□ -1.53
RaraP11416 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RaraP11416 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.51□□□□□ -1.53
RaraP11416 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RaraP11416 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RaraP11416 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RaraP11416 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RaraP11416 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.5□□□□□ -1.53
RaraP11416 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
RaraP11416 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
RaraP11416 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RaraP11416 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.5□□□□□ -1.53
RaraP11416 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RaraP11416 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RaraP11416 Mir879-201ENSMUST00000104703 76 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm13378-201ENSMUST00000117483 336 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm14220-201ENSMUST00000118114 449 ntBASIC5.5□□□□□ -1.53
RaraP11416 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RaraP11416 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.5□□□□□ -1.53
RaraP11416 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC5.5□□□□□ -1.53
RaraP11416 Gm23779-201ENSMUST00000157938 64 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm23179-201ENSMUST00000158693 304 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm4222-201ENSMUST00000165784 470 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm24949-201ENSMUST00000183609 215 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm27541-201ENSMUST00000184078 122 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.5□□□□□ -1.53
RaraP11416 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.5□□□□□ -1.53
RaraP11416 Gm3010-201ENSMUST00000198805 448 ntBASIC5.5□□□□□ -1.53
RaraP11416 Mir6906-201ENSMUST00000198998 58 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm35876-201ENSMUST00000205044 459 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm45616-201ENSMUST00000211711 319 ntBASIC5.5□□□□□ -1.53
RaraP11416 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms