Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm37684-201ENSMUST00000192779 355 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Lire1P11260 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.9□□□□□ -1.79
Lire1P11260 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Lire1P11260 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm43478-201ENSMUST00000200381 292 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm44543-201ENSMUST00000209136 396 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
Lire1P11260 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Lire1P11260 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.9□□□□□ -1.79
Lire1P11260 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.9□□□□□ -1.79
Lire1P11260 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm46190-201ENSMUST00000219650 427 ntBASIC3.9□□□□□ -1.79
Lire1P11260 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Lire1P11260 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Lire1P11260 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
Lire1P11260 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Lire1P11260 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Lire1P11260 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Lire1P11260 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lire1P11260 Mir1193-201ENSMUST00000116761 121 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm14981-201ENSMUST00000117325 943 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm15988-201ENSMUST00000118677 367 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm12719-201ENSMUST00000118859 241 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm13717-201ENSMUST00000119868 365 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm13901-201ENSMUST00000137252 468 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC3.89□□□□□ -1.79
Lire1P11260 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.89□□□□□ -1.79
Lire1P11260 Gm22816-201ENSMUST00000157450 117 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm23554-201ENSMUST00000157818 110 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC3.89□□□□□ -1.79
Lire1P11260 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Lire1P11260 Gm3370-201ENSMUST00000171785 500 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm27896-201ENSMUST00000175162 317 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm20673-201ENSMUST00000177167 430 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm27695-201ENSMUST00000184301 91 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm27940-201ENSMUST00000184449 98 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm28141-201ENSMUST00000186676 342 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.89□□□□□ -1.79
Lire1P11260 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.89□□□□□ -1.79
Lire1P11260 Gm38061-201ENSMUST00000192490 365 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm29740-201ENSMUST00000193182 655 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm38018-201ENSMUST00000195651 540 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm43037-201ENSMUST00000196808 250 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm43651-201ENSMUST00000199796 439 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm5876-201ENSMUST00000203735 243 ntBASIC3.89□□□□□ -1.79
Lire1P11260 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.89□□□□□ -1.79
Lire1P11260 Gm44030-201ENSMUST00000204865 432 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm19126-201ENSMUST00000207896 509 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm18645-201ENSMUST00000209593 651 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm18892-201ENSMUST00000217628 881 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm18338-201ENSMUST00000222381 560 ntBASIC3.89□□□□□ -1.79
Lire1P11260 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.89□□□□□ -1.79
Lire1P11260 Gm10042-201ENSMUST00000079884 78 ntBASIC3.89□□□□□ -1.79
Lire1P11260 AF357341-201ENSMUST00000083088 75 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm26165-201ENSMUST00000083791 138 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Lire1P11260 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Lire1P11260 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Lire1P11260 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.89□□□□□ -1.79
Lire1P11260 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lire1P11260 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lire1P11260 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Lire1P11260 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.89□□□□□ -1.79
Lire1P11260 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.88□□□□□ -1.79
Lire1P11260 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Lire1P11260 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Lire1P11260 Snora64-201ENSMUST00000104521 134 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Lire1P11260 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Lire1P11260 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm2288-201ENSMUST00000118560 638 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm14103-201ENSMUST00000119075 366 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm14916-201ENSMUST00000121904 204 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm10059-201ENSMUST00000131139 171 ntBASIC3.88□□□□□ -1.79
Lire1P11260 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Lire1P11260 Nron-204ENSMUST00000158971 370 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC3.88□□□□□ -1.79
Lire1P11260 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Lire1P11260 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm25026-201ENSMUST00000175017 188 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Lire1P11260 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Lire1P11260 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.88□□□□□ -1.79
Lire1P11260 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.88□□□□□ -1.79
Lire1P11260 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.88□□□□□ -1.79
Lire1P11260 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.88□□□□□ -1.79
Lire1P11260 Gm27921-201ENSMUST00000183968 108 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm28623-201ENSMUST00000187219 192 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm19641-201ENSMUST00000188432 417 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm37601-201ENSMUST00000194922 394 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm19243-201ENSMUST00000198592 269 ntBASIC3.88□□□□□ -1.79
Lire1P11260 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms