Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hoxd3P09027 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm38096-201ENSMUST00000193692 2389 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Hoxd3P09027 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm26147-201ENSMUST00000104479 114 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm22372-201ENSMUST00000104589 136 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm23990-201ENSMUST00000117031 117 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm14657-201ENSMUST00000117461 302 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm6897-201ENSMUST00000117714 138 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm14758-201ENSMUST00000119104 138 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm14842-201ENSMUST00000119577 269 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm13214-201ENSMUST00000122137 408 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm22210-201ENSMUST00000158101 144 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm22384-201ENSMUST00000158187 104 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm27510-201ENSMUST00000158214 64 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm3242-201ENSMUST00000171273 485 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Mirt2-201ENSMUST00000175179 285 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm23921-201ENSMUST00000175258 107 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm22852-201ENSMUST00000177899 101 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm21827-201ENSMUST00000178247 423 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm25473-201ENSMUST00000180191 107 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm29330-201ENSMUST00000190032 699 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm37358-201ENSMUST00000195492 479 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm44319-201ENSMUST00000196974 93 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm25203-202ENSMUST00000200458 216 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm44768-201ENSMUST00000205719 393 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm44539-201ENSMUST00000206010 238 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm45772-201ENSMUST00000212961 240 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm19195-201ENSMUST00000222018 511 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Snora44-201ENSMUST00000082670 129 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm25203-201ENSMUST00000082842 215 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 AC131586.2-202ENSMUST00000227016 2705 ntBASIC4.62□□□□□ -1.67
Hoxd3P09027 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC4.62□□□□□ -1.67
Hoxd3P09027 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Hoxd3P09027 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Hoxd3P09027 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd3P09027 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd3P09027 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm7108-201ENSMUST00000118038 3407 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC4.61□□□□□ -1.67
Hoxd3P09027 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd3P09027 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd3P09027 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd3P09027 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Hoxd3P09027 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd3P09027 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Hoxd3P09027 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd3P09027 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm14803-201ENSMUST00000117163 361 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm15162-201ENSMUST00000119325 283 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm16423-201ENSMUST00000120078 947 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm15331-201ENSMUST00000120225 385 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Mup-ps19-201ENSMUST00000120390 519 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm13531-201ENSMUST00000121893 543 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm23557-201ENSMUST00000157820 138 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm3851-201ENSMUST00000168653 318 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Mir5110-201ENSMUST00000175537 87 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Hoxd3P09027 Mir6393-201ENSMUST00000183709 94 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm27465-201ENSMUST00000184290 91 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm5329-201ENSMUST00000186898 463 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm28453-203ENSMUST00000187041 189 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.61□□□□□ -1.67
Hoxd3P09027 Gm19123-201ENSMUST00000190716 651 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms