Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.23□□□□□ -1.89
ApoeP08226 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ApoeP08226 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ApoeP08226 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ApoeP08226 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ApoeP08226 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.23□□□□□ -1.89
ApoeP08226 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ApoeP08226 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ApoeP08226 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ApoeP08226 Gm23271-201ENSMUST00000104052 124 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm11393-201ENSMUST00000118019 288 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm12722-201ENSMUST00000118507 493 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm9119-201ENSMUST00000118866 495 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm15488-201ENSMUST00000121682 670 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.22□□□□□ -1.89
ApoeP08226 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ApoeP08226 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm23666-201ENSMUST00000158053 116 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm18505-201ENSMUST00000187360 790 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm28552-201ENSMUST00000190725 388 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.22□□□□□ -1.89
ApoeP08226 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ApoeP08226 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ApoeP08226 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ApoeP08226 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ApoeP08226 Gm43441-201ENSMUST00000201458 205 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm6590-201ENSMUST00000203343 687 ntBASIC3.22□□□□□ -1.89
ApoeP08226 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.22□□□□□ -1.89
ApoeP08226 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm18225-201ENSMUST00000216708 742 ntBASIC3.22□□□□□ -1.89
ApoeP08226 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.22□□□□□ -1.89
ApoeP08226 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.22□□□□□ -1.89
ApoeP08226 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ApoeP08226 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ApoeP08226 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
ApoeP08226 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
ApoeP08226 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.22□□□□□ -1.89
ApoeP08226 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ApoeP08226 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
ApoeP08226 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
ApoeP08226 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
ApoeP08226 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ApoeP08226 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.21□□□□□ -1.9
ApoeP08226 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ApoeP08226 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm13379-201ENSMUST00000118053 621 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm12954-201ENSMUST00000118610 611 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm5942-201ENSMUST00000120046 439 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm14383-201ENSMUST00000121637 386 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm25047-201ENSMUST00000122667 104 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.21□□□□□ -1.9
ApoeP08226 Gm24914-201ENSMUST00000157285 313 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm24773-201ENSMUST00000158513 99 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm24875-201ENSMUST00000158888 104 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm10075-201ENSMUST00000162030 545 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.21□□□□□ -1.9
ApoeP08226 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
ApoeP08226 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm27715-201ENSMUST00000184714 260 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm27163-201ENSMUST00000184767 409 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm28390-201ENSMUST00000185212 700 ntBASIC3.21□□□□□ -1.9
ApoeP08226 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ApoeP08226 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.21□□□□□ -1.9
ApoeP08226 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC3.21□□□□□ -1.9
ApoeP08226 Gm37164-201ENSMUST00000192809 637 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm8242-202ENSMUST00000193056 475 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm32447-201ENSMUST00000194265 697 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm43368-201ENSMUST00000200638 409 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm44583-201ENSMUST00000207478 281 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm18602-201ENSMUST00000209794 851 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Gm6841-201ENSMUST00000220602 598 ntBASIC3.21□□□□□ -1.9
ApoeP08226 AC134254.4-201ENSMUST00000223086 370 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ApoeP08226 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ApoeP08226 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
ApoeP08226 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.21□□□□□ -1.9
ApoeP08226 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ApoeP08226 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
ApoeP08226 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.2□□□□□ -1.9
ApoeP08226 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ApoeP08226 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ApoeP08226 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ApoeP08226 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ApoeP08226 Gm23481-201ENSMUST00000104173 131 ntBASIC3.2□□□□□ -1.9
ApoeP08226 Gm15126-201ENSMUST00000118631 833 ntBASIC3.2□□□□□ -1.9
ApoeP08226 Gm11704-201ENSMUST00000120031 214 ntBASIC3.2□□□□□ -1.9
ApoeP08226 Gm15014-201ENSMUST00000120742 258 ntBASIC3.2□□□□□ -1.9
ApoeP08226 Gm24819-201ENSMUST00000175094 166 ntBASIC3.2□□□□□ -1.9
ApoeP08226 Gm25999-201ENSMUST00000175398 133 ntBASIC3.2□□□□□ -1.9
ApoeP08226 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.2□□□□□ -1.9
ApoeP08226 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.2□□□□□ -1.9
ApoeP08226 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms