Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CopeO89079 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CopeO89079 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CopeO89079 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CopeO89079 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CopeO89079 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.21□□□□□ -1.9
CopeO89079 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CopeO89079 Gm37193-201ENSMUST00000193087 513 ntBASIC3.21□□□□□ -1.9
CopeO89079 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CopeO89079 Gm37418-201ENSMUST00000195031 274 ntBASIC3.21□□□□□ -1.9
CopeO89079 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CopeO89079 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.21□□□□□ -1.9
CopeO89079 Gm5983-201ENSMUST00000197739 770 ntBASIC3.21□□□□□ -1.9
CopeO89079 Gm31532-201ENSMUST00000203555 767 ntBASIC3.21□□□□□ -1.9
CopeO89079 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.21□□□□□ -1.9
CopeO89079 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.21□□□□□ -1.9
CopeO89079 Gm5175-202ENSMUST00000219699 529 ntBASIC3.21□□□□□ -1.9
CopeO89079 Gm7540-201ENSMUST00000219764 926 ntBASIC3.21□□□□□ -1.9
CopeO89079 Gm3565-201ENSMUST00000222670 609 ntBASIC3.21□□□□□ -1.9
CopeO89079 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CopeO89079 Gm23815-201ENSMUST00000083231 107 ntBASIC3.21□□□□□ -1.9
CopeO89079 Gm23520-201ENSMUST00000093736 107 ntBASIC3.21□□□□□ -1.9
CopeO89079 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CopeO89079 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.21□□□□□ -1.9
CopeO89079 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.21□□□□□ -1.9
CopeO89079 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CopeO89079 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CopeO89079 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.21□□□□□ -1.9
CopeO89079 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CopeO89079 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CopeO89079 Gm24715-201ENSMUST00000102377 95 ntBASIC3.2□□□□□ -1.9
CopeO89079 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CopeO89079 Gm14622-201ENSMUST00000117117 468 ntBASIC3.2□□□□□ -1.9
CopeO89079 Gm26254-201ENSMUST00000122491 118 ntBASIC3.2□□□□□ -1.9
CopeO89079 Gm22107-201ENSMUST00000122548 100 ntBASIC3.2□□□□□ -1.9
CopeO89079 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.2□□□□□ -1.9
CopeO89079 Gm26362-201ENSMUST00000158865 315 ntBASIC3.2□□□□□ -1.9
CopeO89079 Gm17075-201ENSMUST00000171924 670 ntBASIC3.2□□□□□ -1.9
CopeO89079 Gm27025-201ENSMUST00000182392 942 ntBASIC3.2□□□□□ -1.9
CopeO89079 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CopeO89079 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.2□□□□□ -1.9
CopeO89079 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CopeO89079 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.2□□□□□ -1.9
CopeO89079 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CopeO89079 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.2□□□□□ -1.9
CopeO89079 Gm34272-201ENSMUST00000208886 253 ntBASIC3.2□□□□□ -1.9
CopeO89079 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.2□□□□□ -1.9
CopeO89079 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.2□□□□□ -1.9
CopeO89079 Gm7639-201ENSMUST00000212608 484 ntBASIC3.2□□□□□ -1.9
CopeO89079 Gm18120-201ENSMUST00000220079 511 ntBASIC3.2□□□□□ -1.9
CopeO89079 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CopeO89079 Gm26121-201ENSMUST00000083364 162 ntBASIC3.2□□□□□ -1.9
CopeO89079 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CopeO89079 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CopeO89079 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.2□□□□□ -1.9
CopeO89079 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CopeO89079 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CopeO89079 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.19□□□□□ -1.9
CopeO89079 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CopeO89079 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CopeO89079 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CopeO89079 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CopeO89079 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.19□□□□□ -1.9
CopeO89079 Gm11843-201ENSMUST00000118984 425 ntBASIC3.19□□□□□ -1.9
CopeO89079 Gm14907-201ENSMUST00000121948 854 ntBASIC3.19□□□□□ -1.9
CopeO89079 Gm5392-201ENSMUST00000122189 789 ntBASIC3.19□□□□□ -1.9
CopeO89079 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CopeO89079 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.19□□□□□ -1.9
CopeO89079 Gm27834-201ENSMUST00000183427 125 ntBASIC3.19□□□□□ -1.9
CopeO89079 Gm29602-201ENSMUST00000186887 442 ntBASIC3.19□□□□□ -1.9
CopeO89079 Gm28191-201ENSMUST00000189112 211 ntBASIC3.19□□□□□ -1.9
CopeO89079 Gm5731-201ENSMUST00000190969 481 ntBASIC3.19□□□□□ -1.9
CopeO89079 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.19□□□□□ -1.9
CopeO89079 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CopeO89079 Gm37495-201ENSMUST00000194590 264 ntBASIC3.19□□□□□ -1.9
CopeO89079 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CopeO89079 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.19□□□□□ -1.9
CopeO89079 Gm18225-201ENSMUST00000216708 742 ntBASIC3.19□□□□□ -1.9
CopeO89079 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CopeO89079 Gm46233-201ENSMUST00000217831 449 ntBASIC3.19□□□□□ -1.9
CopeO89079 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.19□□□□□ -1.9
CopeO89079 Gm18116-201ENSMUST00000220920 537 ntBASIC3.19□□□□□ -1.9
CopeO89079 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.19□□□□□ -1.9
CopeO89079 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.19□□□□□ -1.9
CopeO89079 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CopeO89079 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CopeO89079 Gm22304-201ENSMUST00000082688 129 ntBASIC3.19□□□□□ -1.9
CopeO89079 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CopeO89079 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
CopeO89079 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CopeO89079 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CopeO89079 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.19□□□□□ -1.9
CopeO89079 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.18□□□□□ -1.9
CopeO89079 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CopeO89079 Gm24581-201ENSMUST00000103962 133 ntBASIC3.18□□□□□ -1.9
CopeO89079 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CopeO89079 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.18□□□□□ -1.9
CopeO89079 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.18□□□□□ -1.9
CopeO89079 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CopeO89079 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms