Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Gm42758-201ENSMUST00000202146 283 ntBASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Gm45551-201ENSMUST00000211459 928 ntBASIC3.8□□□□□ -1.8
Srp54bE9PXC0 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.8□□□□□ -1.8
Srp54bE9PXC0 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.8□□□□□ -1.8
Srp54bE9PXC0 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.8□□□□□ -1.8
Srp54bE9PXC0 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Srp54bE9PXC0 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Srp54bE9PXC0 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm6071-201ENSMUST00000119561 440 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm22792-201ENSMUST00000157225 133 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm25572-201ENSMUST00000157527 172 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Mir6411-201ENSMUST00000183556 108 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Mir6715-201ENSMUST00000184990 57 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm27392-201ENSMUST00000185041 101 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm18727-201ENSMUST00000185981 553 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm28594-201ENSMUST00000187022 661 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm38281-201ENSMUST00000192301 315 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm37001-201ENSMUST00000193377 190 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm44348-201ENSMUST00000200165 122 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm42850-201ENSMUST00000202094 201 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm7119-201ENSMUST00000221345 695 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.79□□□□□ -1.8
Srp54bE9PXC0 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Srp54bE9PXC0 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm15719-201ENSMUST00000120619 635 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm14845-201ENSMUST00000121259 306 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm24289-201ENSMUST00000157629 135 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm24537-201ENSMUST00000157950 102 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm23152-201ENSMUST00000175322 116 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm7094-201ENSMUST00000178379 366 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Srp54bE9PXC0 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm5552-201ENSMUST00000197149 515 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm19243-201ENSMUST00000198592 269 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm45379-201ENSMUST00000211772 549 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 AC121114.1-201ENSMUST00000228522 570 ntBASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Srp54bE9PXC0 Gm12582-201ENSMUST00000030555 697 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms