Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.5□□□□□ -2.01
Trav11A0A0B4J1J9 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trav11A0A0B4J1J9 AC153801.2-201ENSMUST00000219875 3372 ntBASIC2.5□□□□□ -2.01
Trav11A0A0B4J1J9 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Trav11A0A0B4J1J9 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm37936-201ENSMUST00000194647 1322 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm11429-201ENSMUST00000119089 144 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm16017-201ENSMUST00000119834 208 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm15733-201ENSMUST00000132957 242 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm24289-201ENSMUST00000157629 135 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm25436-201ENSMUST00000158275 145 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm23257-201ENSMUST00000158322 132 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm25713-201ENSMUST00000158625 109 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm22501-201ENSMUST00000158981 127 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm16101-201ENSMUST00000160695 430 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm6155-201ENSMUST00000173735 341 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm4761-201ENSMUST00000178086 582 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm2950-201ENSMUST00000185530 520 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm37523-201ENSMUST00000194901 412 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm43370-201ENSMUST00000196437 284 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 AC174780.1-201ENSMUST00000199415 1107 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm8820-201ENSMUST00000204077 571 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm45434-201ENSMUST00000210550 293 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm7751-201ENSMUST00000212868 709 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm19233-201ENSMUST00000219772 936 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 AC140930.4-201ENSMUST00000220750 150 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 AC154198.1-201ENSMUST00000222839 424 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 AC100733.1-201ENSMUST00000228494 407 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Trav11A0A0B4J1J9 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm37655-201ENSMUST00000193968 4123 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm14570-201ENSMUST00000119444 391 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm11600-201ENSMUST00000119592 240 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Amd-ps1-201ENSMUST00000120127 994 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm11575-201ENSMUST00000122243 228 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm23887-201ENSMUST00000122683 172 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm25913-201ENSMUST00000157617 135 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm22764-201ENSMUST00000158370 92 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm17117-201ENSMUST00000163665 299 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm7346-201ENSMUST00000169661 476 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm26866-201ENSMUST00000180414 802 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm27695-201ENSMUST00000184301 91 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm37416-201ENSMUST00000193596 318 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm37417-201ENSMUST00000195257 454 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm18384-201ENSMUST00000195974 808 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm20177-201ENSMUST00000203705 334 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm45814-201ENSMUST00000212646 775 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm35857-201ENSMUST00000212739 178 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 AC107864.1-201ENSMUST00000217937 496 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm19563-201ENSMUST00000222031 270 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm22005-201ENSMUST00000082795 141 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 n-R5s54-201ENSMUST00000083837 112 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Gm42585-201ENSMUST00000198731 4020 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.48□□□□□ -2.01
Trav11A0A0B4J1J9 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms