Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm12285-201ENSMUST00000117347 233 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm16431-201ENSMUST00000117454 431 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm15426-201ENSMUST00000117823 556 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm11219-201ENSMUST00000118565 358 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm8757-201ENSMUST00000119660 372 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm13687-201ENSMUST00000119857 282 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm6373-201ENSMUST00000121026 360 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm6591-201ENSMUST00000121063 434 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm14500-201ENSMUST00000121647 113 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm23179-201ENSMUST00000158693 304 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm8649-201ENSMUST00000181799 233 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Mir6921-201ENSMUST00000183719 80 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm43309-201ENSMUST00000200837 458 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm43919-201ENSMUST00000204303 364 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm17779-201ENSMUST00000213395 394 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 AC073947.3-201ENSMUST00000215576 766 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm6049-201ENSMUST00000222369 458 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Ear14-201ENSMUST00000049559 468 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm22977-201ENSMUST00000082615 107 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm23503-201ENSMUST00000083903 107 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.03□□□□□ -1.77
H2afb3S4R1G7 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm22498-201ENSMUST00000104497 86 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm13213-201ENSMUST00000119668 474 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm14175-201ENSMUST00000119835 241 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm13482-201ENSMUST00000119842 254 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm12564-201ENSMUST00000119860 321 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm11894-201ENSMUST00000121579 328 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm14649-201ENSMUST00000121814 324 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm22452-201ENSMUST00000122804 104 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm23435-201ENSMUST00000157183 156 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm24251-201ENSMUST00000157324 114 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm24965-201ENSMUST00000157922 106 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm25906-201ENSMUST00000158489 126 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm23619-201ENSMUST00000178411 94 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm25474-201ENSMUST00000179052 94 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm22047-201ENSMUST00000179176 94 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm21850-201ENSMUST00000179792 359 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Mir6541-201ENSMUST00000183649 110 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm27849-201ENSMUST00000183673 125 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Mir7022-201ENSMUST00000183749 61 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm5116-201ENSMUST00000187732 463 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm29627-201ENSMUST00000187984 463 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm28404-201ENSMUST00000190242 453 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Trbv8-201ENSMUST00000194020 285 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm37418-201ENSMUST00000195031 274 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm42830-201ENSMUST00000196642 313 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm42924-201ENSMUST00000197261 185 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm45007-201ENSMUST00000206237 366 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm29754-201ENSMUST00000206269 358 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm44818-201ENSMUST00000206608 358 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm45427-201ENSMUST00000209572 1253 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 Gm18644-201ENSMUST00000211458 815 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 AC109212.1-201ENSMUST00000215561 427 ntBASIC4.02□□□□□ -1.77
H2afb3S4R1G7 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.02□□□□□ -1.77
H2afb3S4R1G7 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms