Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm32295-201ENSMUST00000192558 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm37433-201ENSMUST00000192695 678 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm31260-201ENSMUST00000193478 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm37441-201ENSMUST00000194430 678 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm38107-201ENSMUST00000194873 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm44399-201ENSMUST00000205043 226 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm44559-201ENSMUST00000207177 1012 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm45778-201ENSMUST00000211959 153 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm43826-201ENSMUST00000199604 2612 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Gm12723-201ENSMUST00000120700 451 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Gm15466-201ENSMUST00000122299 333 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Gm24213-201ENSMUST00000158255 258 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Gm20612-201ENSMUST00000176318 236 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Gm43478-201ENSMUST00000200381 292 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 Gm10997-201ENSMUST00000210294 1500 ntBASIC3.07□□□□□ -1.92
Scn8aQ9WTU3 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm7071-201ENSMUST00000120458 462 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm15986-201ENSMUST00000122153 400 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm24019-201ENSMUST00000178620 107 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm26243-201ENSMUST00000179260 107 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm29218-205ENSMUST00000190846 615 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm45814-201ENSMUST00000212646 775 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm23296-201ENSMUST00000082555 107 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm24859-201ENSMUST00000082729 107 ntBASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Scn8aQ9WTU3 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Gm33973-201ENSMUST00000195148 534 ntBASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Gm43476-201ENSMUST00000197873 405 ntBASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Gm22154-201ENSMUST00000083844 131 ntBASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Gm11866-201ENSMUST00000120209 335 ntBASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Mir184-201ENSMUST00000083662 69 ntBASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Scn8aQ9WTU3 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.04□□□□□ -1.92
Scn8aQ9WTU3 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Scn8aQ9WTU3 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Scn8aQ9WTU3 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Scn8aQ9WTU3 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Scn8aQ9WTU3 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Scn8aQ9WTU3 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Scn8aQ9WTU3 Gm21991-201ENSMUST00000180006 508 ntBASIC3.04□□□□□ -1.92
Scn8aQ9WTU3 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms