Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm26556-201ENSMUST00000180645 320 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm38214-201ENSMUST00000192581 988 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm37993-201ENSMUST00000195301 988 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Mir132-201ENSMUST00000083603 66 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm22488-201ENSMUST00000116811 127 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm14142-201ENSMUST00000117833 296 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm11923-201ENSMUST00000118135 508 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm12788-201ENSMUST00000119090 308 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm16147-201ENSMUST00000162143 373 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm27308-201ENSMUST00000184807 233 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm28654-201ENSMUST00000189801 379 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm43704-201ENSMUST00000196164 496 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim3Q9R1R2 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm24792-201ENSMUST00000104286 128 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm16053-201ENSMUST00000120511 188 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm26276-201ENSMUST00000157099 109 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm24537-201ENSMUST00000157950 102 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm22531-201ENSMUST00000158819 140 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm24976-201ENSMUST00000158972 135 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm20693-201ENSMUST00000177431 211 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm22252-201ENSMUST00000179316 79 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm37001-201ENSMUST00000193377 190 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm38098-201ENSMUST00000194115 241 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm18585-201ENSMUST00000215197 556 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm22043-201ENSMUST00000082993 158 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Olfr713-201ENSMUST00000098139 975 ntBASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim3Q9R1R2 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Trim3Q9R1R2 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Trim3Q9R1R2 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Trim3Q9R1R2 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Trim3Q9R1R2 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
Trim3Q9R1R2 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms