Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trem1Q9JKE2 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.26□□□□□ -1.89
Trem1Q9JKE2 CT025689.2-201ENSMUST00000224979 429 ntBASIC3.26□□□□□ -1.89
Trem1Q9JKE2 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trem1Q9JKE2 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trem1Q9JKE2 Gm22864-201ENSMUST00000083950 130 ntBASIC3.26□□□□□ -1.89
Trem1Q9JKE2 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trem1Q9JKE2 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trem1Q9JKE2 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm14570-201ENSMUST00000119444 391 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm11931-201ENSMUST00000121630 447 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm14473-201ENSMUST00000122269 557 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm26310-201ENSMUST00000157766 117 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm26036-201ENSMUST00000158149 144 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm23215-201ENSMUST00000178153 121 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm22252-201ENSMUST00000179316 79 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm27849-201ENSMUST00000183673 125 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm43407-201ENSMUST00000199816 317 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm44030-201ENSMUST00000204865 432 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm44650-201ENSMUST00000206929 194 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm44871-201ENSMUST00000207821 497 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.25□□□□□ -1.89
Trem1Q9JKE2 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm9850-201ENSMUST00000117916 227 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm11253-201ENSMUST00000118486 201 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm13717-201ENSMUST00000119868 365 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm13852-201ENSMUST00000122350 242 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm24289-201ENSMUST00000157629 135 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm24014-201ENSMUST00000157728 157 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm17194-201ENSMUST00000164610 348 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Mir3060-201ENSMUST00000175339 83 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Mir5136-201ENSMUST00000175573 76 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Mir6391-201ENSMUST00000184391 104 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm8641-201ENSMUST00000186995 826 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm38046-201ENSMUST00000192733 550 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm8745-201ENSMUST00000207846 782 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm18645-202ENSMUST00000212222 760 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Mecom-201ENSMUST00000061088 348 ntBASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trem1Q9JKE2 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm12149-201ENSMUST00000117511 654 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm25807-201ENSMUST00000122783 305 ntBASIC3.23□□□□□ -1.89
Trem1Q9JKE2 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 130.6 ms