Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm24890-201ENSMUST00000104389 102 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm13471-201ENSMUST00000122057 433 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm22107-201ENSMUST00000122548 100 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm27592-201ENSMUST00000157729 126 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm16026-202ENSMUST00000159695 772 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm22174-201ENSMUST00000175050 125 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm22692-201ENSMUST00000175055 125 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm27634-201ENSMUST00000175060 126 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm22460-201ENSMUST00000175269 124 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm25535-201ENSMUST00000175364 125 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm24365-201ENSMUST00000175384 125 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm44310-201ENSMUST00000175424 126 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm22639-201ENSMUST00000175591 125 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm24979-201ENSMUST00000178626 126 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm27743-201ENSMUST00000185136 126 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm29525-201ENSMUST00000189844 699 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm19620-201ENSMUST00000195972 434 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm7786-201ENSMUST00000210494 436 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm26064-201ENSMUST00000083381 109 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Lima1Q9ERG0 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.22□□□□□ -1.89
Lima1Q9ERG0 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Mir291a-201ENSMUST00000104815 82 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm22059-201ENSMUST00000157544 104 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Mir3106-201ENSMUST00000175401 82 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm28877-201ENSMUST00000191349 604 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm37097-201ENSMUST00000193676 336 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm18433-202ENSMUST00000195682 196 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm3189-201ENSMUST00000205595 832 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm18116-201ENSMUST00000220920 537 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm23736-201ENSMUST00000082553 75 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Lima1Q9ERG0 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm24792-201ENSMUST00000104286 128 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm15195-201ENSMUST00000118775 263 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm24998-201ENSMUST00000157908 89 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm25432-201ENSMUST00000158284 66 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm27308-201ENSMUST00000184807 233 ntBASIC3.2□□□□□ -1.9
Lima1Q9ERG0 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.2□□□□□ -1.9
Lima1Q9ERG0 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms