Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm45367-201ENSMUST00000210171 347 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm8231-201ENSMUST00000221617 783 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 AC154600.1-201ENSMUST00000226480 714 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm22364-201ENSMUST00000083097 98 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm23677-201ENSMUST00000083156 104 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm14619-201ENSMUST00000120480 168 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm13867-201ENSMUST00000120844 395 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm13132-201ENSMUST00000121194 472 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm8649-201ENSMUST00000181799 233 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Mir6382-201ENSMUST00000184055 110 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm27332-201ENSMUST00000184893 112 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Mir6993-201ENSMUST00000184912 65 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Mir6516-201ENSMUST00000196236 110 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm4734-201ENSMUST00000200117 777 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm7039-201ENSMUST00000205138 346 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 AC154296.2-201ENSMUST00000214696 545 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 AL929417.1-201ENSMUST00000214901 124 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm31849-201ENSMUST00000220306 375 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm23686-201ENSMUST00000083241 164 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf1Q9EPU0 Gm37211-201ENSMUST00000193392 3433 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm23744-201ENSMUST00000104231 149 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm11598-201ENSMUST00000119257 357 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm5060-201ENSMUST00000120072 599 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm22208-201ENSMUST00000122658 110 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm25555-201ENSMUST00000158078 111 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm16566-201ENSMUST00000160387 910 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm9569-201ENSMUST00000187492 787 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm38044-201ENSMUST00000192964 487 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm8790-201ENSMUST00000194108 322 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm37817-201ENSMUST00000195276 434 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm45232-201ENSMUST00000207811 162 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm45427-201ENSMUST00000209572 1253 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm19140-201ENSMUST00000209790 421 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.52□□□□□ -1.53
Upf1Q9EPU0 AC131677.1-201ENSMUST00000218721 535 ntBASIC5.52□□□□□ -1.53
Upf1Q9EPU0 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms