Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm8988-201ENSMUST00000155015 1240 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm25967-201ENSMUST00000157168 147 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm9890-201ENSMUST00000171867 537 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm20542-201ENSMUST00000174582 372 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Mir3473a-201ENSMUST00000175011 78 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Mir5098-201ENSMUST00000175320 82 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm5527-201ENSMUST00000179821 642 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm29104-201ENSMUST00000186304 222 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm43975-201ENSMUST00000203023 481 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm43932-201ENSMUST00000204499 52 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm30674-201ENSMUST00000214523 392 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.28□□□□□ -1.88
Ccdc3Q9D6Y1 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm13122-201ENSMUST00000118380 453 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm13167-201ENSMUST00000118554 578 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm12448-201ENSMUST00000118852 655 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm13873-201ENSMUST00000119208 427 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm7308-201ENSMUST00000121087 447 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm22036-201ENSMUST00000157279 215 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm24965-201ENSMUST00000157922 106 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm24537-201ENSMUST00000157950 102 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm24930-201ENSMUST00000158315 83 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm24666-201ENSMUST00000158937 167 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm16563-201ENSMUST00000162673 423 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm7094-201ENSMUST00000178379 366 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm22910-201ENSMUST00000178568 132 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm7142-201ENSMUST00000194232 586 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm38356-201ENSMUST00000194313 408 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm25308-201ENSMUST00000104171 158 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm12880-201ENSMUST00000120652 494 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm23791-201ENSMUST00000122553 293 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm26027-201ENSMUST00000122725 268 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm7855-201ENSMUST00000137737 687 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm26100-201ENSMUST00000157245 127 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm25432-201ENSMUST00000158284 66 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm9379-201ENSMUST00000196790 646 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm18388-201ENSMUST00000222339 557 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Snord35b-201ENSMUST00000082833 87 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm22043-201ENSMUST00000082993 158 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm10242-201ENSMUST00000090064 330 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.26□□□□□ -1.89
Ccdc3Q9D6Y1 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc3Q9D6Y1 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms