Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm45063-201ENSMUST00000203726 472 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm18944-201ENSMUST00000207672 643 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm18039-201ENSMUST00000217816 728 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Smc1aQ9CU62 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Smc1aQ9CU62 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm25272-201ENSMUST00000104293 128 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm15988-201ENSMUST00000118677 367 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm25047-201ENSMUST00000122667 104 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm25977-201ENSMUST00000158697 85 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm22531-201ENSMUST00000158819 140 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm18604-201ENSMUST00000172535 558 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm8902-201ENSMUST00000174341 1096 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm22693-201ENSMUST00000175049 442 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm27392-201ENSMUST00000185041 101 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm28552-201ENSMUST00000190725 388 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm29524-201ENSMUST00000190819 699 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm34005-201ENSMUST00000215834 282 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 AC151843.1-201ENSMUST00000215960 691 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Olfr936-202ENSMUST00000216912 937 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm24147-201ENSMUST00000082763 144 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm23518-201ENSMUST00000082835 153 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Smc1aQ9CU62 AC124746.1-201ENSMUST00000227535 1300 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Smc1aQ9CU62 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Smc1aQ9CU62 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm24127-201ENSMUST00000104110 130 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm15613-201ENSMUST00000118396 326 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm11881-201ENSMUST00000119408 572 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm11387-201ENSMUST00000120266 772 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm12897-201ENSMUST00000120341 250 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm27189-201ENSMUST00000184119 190 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm27445-201ENSMUST00000184484 72 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm29334-201ENSMUST00000190334 357 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm7299-201ENSMUST00000194441 581 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm43039-201ENSMUST00000202883 963 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm44585-201ENSMUST00000207150 607 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm45379-201ENSMUST00000211772 549 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm18921-201ENSMUST00000221798 366 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Smc1aQ9CU62 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.11□□□□□ -1.75
Smc1aQ9CU62 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm13831-201ENSMUST00000118764 302 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm13273-201ENSMUST00000119737 159 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm14687-201ENSMUST00000120206 363 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm23167-201ENSMUST00000157155 103 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm23198-201ENSMUST00000158811 91 ntBASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.1□□□□□ -1.75
Smc1aQ9CU62 Gm37098-201ENSMUST00000192290 244 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms