Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm23116-201ENSMUST00000158481 67 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm26866-201ENSMUST00000180414 802 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm20574-201ENSMUST00000182867 917 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Mir6238-201ENSMUST00000184140 129 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Mir8096-201ENSMUST00000184526 127 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm44349-201ENSMUST00000197048 123 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm43494-201ENSMUST00000197672 388 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm19039-201ENSMUST00000204363 575 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm36776-201ENSMUST00000207006 203 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm22971-201ENSMUST00000083305 97 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.36□□□□□ -1.87
Rpa3Q9CQ71 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm12230-201ENSMUST00000118301 454 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm14927-201ENSMUST00000120283 454 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm12880-201ENSMUST00000120652 494 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm12693-201ENSMUST00000121965 483 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm22956-201ENSMUST00000122520 80 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm24314-201ENSMUST00000158274 123 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm16563-201ENSMUST00000162673 423 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm4761-201ENSMUST00000178086 582 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm6900-201ENSMUST00000178971 342 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm18406-201ENSMUST00000185872 669 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm45474-201ENSMUST00000209471 408 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm19987-201ENSMUST00000216339 499 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gm10212-201ENSMUST00000087884 324 ntBASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Rpa3Q9CQ71 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm12982-201ENSMUST00000117408 190 ntBASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm11260-201ENSMUST00000121163 942 ntBASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm23152-201ENSMUST00000175322 116 ntBASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm7094-201ENSMUST00000178379 366 ntBASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm18433-202ENSMUST00000195682 196 ntBASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm43975-201ENSMUST00000203023 481 ntBASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm44118-201ENSMUST00000204665 229 ntBASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm44513-201ENSMUST00000206811 439 ntBASIC3.34□□□□□ -1.87
Rpa3Q9CQ71 Gm7624-201ENSMUST00000209702 435 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms