Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm26100-201ENSMUST00000157245 127 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Gm8807-201ENSMUST00000179328 492 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Mir6963-201ENSMUST00000183535 71 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Gm5983-201ENSMUST00000197739 770 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Snora7a-201ENSMUST00000082629 140 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Gm14771-201ENSMUST00000118249 203 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Gm26061-201ENSMUST00000175584 108 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Mir6385-201ENSMUST00000184295 105 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Gm37828-201ENSMUST00000192496 432 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Gm17966-201ENSMUST00000193453 594 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Gm37495-201ENSMUST00000194590 264 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Gm34779-201ENSMUST00000210036 263 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Gm45312-201ENSMUST00000210566 311 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Gm46233-201ENSMUST00000217831 449 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc28aQ8CEI3 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm25833-201ENSMUST00000104137 133 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm14987-201ENSMUST00000117820 676 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm14716-201ENSMUST00000120138 718 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm25572-201ENSMUST00000157527 172 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm28628-201ENSMUST00000187006 264 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm28629-201ENSMUST00000187309 263 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm37490-201ENSMUST00000195566 724 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm44092-201ENSMUST00000204470 258 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm45690-201ENSMUST00000210775 246 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm21007-201ENSMUST00000221024 326 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm22245-201ENSMUST00000082479 103 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Mir193b-201ENSMUST00000103784 79 ntBASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Gm12427-201ENSMUST00000117719 302 ntBASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Gm14647-201ENSMUST00000119392 680 ntBASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Gm13471-201ENSMUST00000122057 433 ntBASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Gm16274-201ENSMUST00000139251 592 ntBASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Gm23234-201ENSMUST00000157304 134 ntBASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Mir1934-201ENSMUST00000158127 83 ntBASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Mir6238-201ENSMUST00000184140 129 ntBASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Gm18529-201ENSMUST00000193025 1257 ntBASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.23□□□□□ -1.89
Ccdc28aQ8CEI3 Gm45080-201ENSMUST00000206648 283 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms