Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm43405-201ENSMUST00000198642 337 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm19126-201ENSMUST00000207896 509 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm18899-201ENSMUST00000217663 546 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm10794-201ENSMUST00000099624 207 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm24273-201ENSMUST00000102332 164 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm24544-201ENSMUST00000103862 110 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm13460-201ENSMUST00000121274 353 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm24553-201ENSMUST00000158653 131 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm24811-201ENSMUST00000175313 100 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21842-201ENSMUST00000177552 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21626-201ENSMUST00000177791 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21562-201ENSMUST00000177888 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21539-201ENSMUST00000177925 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm17522-201ENSMUST00000178144 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21599-201ENSMUST00000178249 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21914-201ENSMUST00000178452 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21723-201ENSMUST00000178692 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21916-201ENSMUST00000178771 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21801-201ENSMUST00000178865 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21633-201ENSMUST00000178941 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm17412-201ENSMUST00000179261 468 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21821-201ENSMUST00000179646 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21588-201ENSMUST00000180074 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21780-201ENSMUST00000180128 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21572-201ENSMUST00000180134 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm21529-201ENSMUST00000180175 498 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm29370-202ENSMUST00000187476 499 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm36985-201ENSMUST00000195595 379 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm18903-201ENSMUST00000215343 480 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm9765-201ENSMUST00000043170 321 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm9845-201ENSMUST00000056409 598 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm24319-201ENSMUST00000083389 107 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.19□□□□□ -1.9
Trub1Q8C0D0 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm15854-201ENSMUST00000118879 808 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm13717-201ENSMUST00000119868 365 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm11876-201ENSMUST00000120002 269 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm22956-201ENSMUST00000122520 80 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm23791-201ENSMUST00000122553 293 ntBASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.18□□□□□ -1.9
Trub1Q8C0D0 Gm22226-201ENSMUST00000157355 109 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms