Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm25970-201ENSMUST00000157165 86 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm24737-201ENSMUST00000158861 100 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm28629-201ENSMUST00000187309 263 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm44254-201ENSMUST00000204184 322 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm44149-201ENSMUST00000204256 226 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm18644-201ENSMUST00000211458 815 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm46998-201ENSMUST00000221444 330 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm26072-201ENSMUST00000083135 107 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm23452-201ENSMUST00000083327 107 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm15151-201ENSMUST00000117106 177 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm12173-201ENSMUST00000117622 273 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm12677-201ENSMUST00000118668 426 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm15452-201ENSMUST00000119877 240 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm12486-201ENSMUST00000120887 541 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm17030-201ENSMUST00000167016 393 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm24561-201ENSMUST00000175182 95 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm23047-201ENSMUST00000177661 94 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm25944-201ENSMUST00000178758 94 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm28471-201ENSMUST00000185994 615 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm43976-201ENSMUST00000203637 235 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm43892-201ENSMUST00000204373 265 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm44687-201ENSMUST00000204975 235 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm19237-201ENSMUST00000205036 1132 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm45530-201ENSMUST00000211658 225 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm31931-201ENSMUST00000219666 222 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm7808-201ENSMUST00000082002 387 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.92□□□□□ -1.46
Usp40Q8BWR4 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Usp40Q8BWR4 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm44434-201ENSMUST00000203918 3745 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Mir466i-201ENSMUST00000116924 121 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm6664-201ENSMUST00000119138 468 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm12935-201ENSMUST00000119352 246 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm22478-201ENSMUST00000122570 154 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm25669-201ENSMUST00000157699 112 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm22534-201ENSMUST00000158173 104 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm25447-201ENSMUST00000158997 128 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm8296-201ENSMUST00000185597 524 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm36998-201ENSMUST00000193205 704 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm42566-201ENSMUST00000197120 643 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm44468-201ENSMUST00000199516 105 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm17991-201ENSMUST00000208139 297 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm18903-201ENSMUST00000215343 480 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 AC160970.1-201ENSMUST00000219311 475 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm5548-201ENSMUST00000055878 397 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Gm10042-201ENSMUST00000079884 78 ntBASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Usp40Q8BWR4 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms