Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nup54Q8BTS4 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Nup54Q8BTS4 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Nup54Q8BTS4 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.72□□□□□ -1.81
Nup54Q8BTS4 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.72□□□□□ -1.81
Nup54Q8BTS4 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Nup54Q8BTS4 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nup54Q8BTS4 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nup54Q8BTS4 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.71□□□□□ -1.81
Nup54Q8BTS4 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Nup54Q8BTS4 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
Nup54Q8BTS4 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm22488-201ENSMUST00000116811 127 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm13471-201ENSMUST00000122057 433 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm2892-201ENSMUST00000145537 711 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm25981-201ENSMUST00000157921 295 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm24080-201ENSMUST00000175178 232 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Spin2g-201ENSMUST00000178425 687 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm24969-201ENSMUST00000180331 79 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm27952-201ENSMUST00000184748 105 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm8600-201ENSMUST00000186320 905 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm37989-201ENSMUST00000195202 803 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Mir703-201ENSMUST00000197105 109 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm44355-201ENSMUST00000200417 104 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm44887-201ENSMUST00000208980 178 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm19219-201ENSMUST00000215863 724 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm29884-201ENSMUST00000218403 453 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm23455-201ENSMUST00000083331 100 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nup54Q8BTS4 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm14975-201ENSMUST00000118741 664 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm11387-201ENSMUST00000120266 772 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm12755-201ENSMUST00000122297 282 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm23666-201ENSMUST00000158053 116 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm22501-201ENSMUST00000158981 127 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm27535-201ENSMUST00000183814 157 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm29524-201ENSMUST00000190819 699 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm37164-201ENSMUST00000192809 637 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Trav12-4-201ENSMUST00000200663 271 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm43228-201ENSMUST00000200735 264 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm44332-201ENSMUST00000203712 433 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm7407-201ENSMUST00000208301 568 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm23736-201ENSMUST00000082553 75 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm22829-201ENSMUST00000083771 106 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.7□□□□□ -1.82
Nup54Q8BTS4 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms