Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm7449-201ENSMUST00000194393 663 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm42453-201ENSMUST00000200477 409 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm20177-201ENSMUST00000203705 334 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm23271-201ENSMUST00000104052 124 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm12509-201ENSMUST00000118033 609 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm11923-201ENSMUST00000118135 508 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm13678-201ENSMUST00000118926 340 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm12900-201ENSMUST00000120919 573 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm26476-201ENSMUST00000122618 313 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm23228-201ENSMUST00000157296 270 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm43897-201ENSMUST00000204019 309 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm9373-201ENSMUST00000208724 599 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.87□□□□□ -1.79
Ccdc40Q8BI79 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm24125-201ENSMUST00000104105 137 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm25560-201ENSMUST00000104606 176 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Mir294-201ENSMUST00000104710 84 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm14627-201ENSMUST00000118931 567 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm15231-201ENSMUST00000119174 447 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm12515-201ENSMUST00000120116 361 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm22816-201ENSMUST00000157450 117 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm22501-201ENSMUST00000158981 127 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm23365-201ENSMUST00000175019 125 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm25960-201ENSMUST00000175110 125 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm44453-201ENSMUST00000175161 126 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm25999-201ENSMUST00000175398 133 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm25195-201ENSMUST00000177656 126 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm25198-201ENSMUST00000178574 110 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm6113-201ENSMUST00000180319 639 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm10292-201ENSMUST00000183142 581 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Mir3620-201ENSMUST00000184710 61 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm18727-201ENSMUST00000185981 553 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm8600-201ENSMUST00000186320 905 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm45316-201ENSMUST00000210128 162 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm9628-201ENSMUST00000222169 725 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc40Q8BI79 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms