Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm25560-201ENSMUST00000104606 176 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm7834-201ENSMUST00000117560 437 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm13550-201ENSMUST00000118185 525 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm14793-201ENSMUST00000118739 311 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm12190-201ENSMUST00000120001 187 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm14785-201ENSMUST00000120185 539 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm11829-201ENSMUST00000121003 282 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm22236-201ENSMUST00000157093 106 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm23905-201ENSMUST00000157568 109 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm24438-201ENSMUST00000157893 115 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm19427-201ENSMUST00000183619 208 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm29320-201ENSMUST00000185235 615 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm29179-202ENSMUST00000186138 615 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm28666-201ENSMUST00000186649 274 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm29448-201ENSMUST00000186675 615 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm29314-201ENSMUST00000186800 615 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm29045-201ENSMUST00000187278 698 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm28253-202ENSMUST00000187971 615 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm29169-201ENSMUST00000189835 615 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm28655-201ENSMUST00000191538 692 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm37601-201ENSMUST00000194922 394 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm43925-201ENSMUST00000203498 206 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm45171-201ENSMUST00000206360 736 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm45735-201ENSMUST00000212779 319 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm25586-201ENSMUST00000082499 112 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm11393-201ENSMUST00000118019 288 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm12509-201ENSMUST00000118033 609 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm14815-201ENSMUST00000120060 488 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm14915-201ENSMUST00000120747 204 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm12103-201ENSMUST00000121892 362 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm14916-201ENSMUST00000121904 204 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 n-R5s207-201ENSMUST00000122497 118 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm23312-201ENSMUST00000158774 102 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm8221-201ENSMUST00000178052 564 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm27834-201ENSMUST00000183427 125 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm28255-201ENSMUST00000187101 694 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm29479-201ENSMUST00000190352 455 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm37817-201ENSMUST00000195276 434 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm31849-201ENSMUST00000220306 375 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Gm22810-201ENSMUST00000082741 158 ntBASIC4.3□□□□□ -1.72
Ubfd1Q78JW9 Mir99a-201ENSMUST00000083596 65 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms