Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4□□□□□ -1.77
Hmgb4Q6P8W9 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb4Q6P8W9 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb4Q6P8W9 Gm37527-201ENSMUST00000192406 3547 ntBASIC4□□□□□ -1.77
Hmgb4Q6P8W9 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb4Q6P8W9 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Mir1192-201ENSMUST00000116976 121 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm15110-201ENSMUST00000117545 881 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm14795-201ENSMUST00000118461 471 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm15268-201ENSMUST00000118845 352 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm14238-201ENSMUST00000120227 323 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm14875-201ENSMUST00000120881 319 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm22320-201ENSMUST00000157149 312 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm25979-201ENSMUST00000157177 138 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm2862-201ENSMUST00000161524 328 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Mir6401-201ENSMUST00000184499 109 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm29640-201ENSMUST00000187972 278 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm17781-201ENSMUST00000195232 649 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm29704-201ENSMUST00000196011 253 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm19243-201ENSMUST00000198592 269 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm6112-201ENSMUST00000208037 629 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm45317-201ENSMUST00000210385 223 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm18116-201ENSMUST00000220920 537 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm3565-201ENSMUST00000222670 609 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm23925-201ENSMUST00000082471 132 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hmgb4Q6P8W9 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm14607-201ENSMUST00000119119 491 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm12691-201ENSMUST00000120186 456 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm25606-201ENSMUST00000158363 95 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm3851-201ENSMUST00000168653 318 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm27189-201ENSMUST00000184119 190 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm28920-201ENSMUST00000189957 699 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm7041-201ENSMUST00000201227 524 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm44092-201ENSMUST00000204470 258 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm44634-201ENSMUST00000206119 152 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm7540-201ENSMUST00000219764 926 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm2544-201ENSMUST00000222702 756 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm23736-201ENSMUST00000082553 75 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb4Q6P8W9 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Gm6913-201ENSMUST00000100019 348 ntBASIC3.97□□□□□ -1.77
Hmgb4Q6P8W9 Mir208b-201ENSMUST00000104735 77 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms