Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Gm11488-201ENSMUST00000117277 863 ntBASIC2.54□□□□□ -2
Ss18Q62280 Gm12568-201ENSMUST00000117362 624 ntBASIC2.54□□□□□ -2
Ss18Q62280 Gm13167-201ENSMUST00000118554 578 ntBASIC2.54□□□□□ -2
Ss18Q62280 n-R5s68-201ENSMUST00000122639 82 ntBASIC2.54□□□□□ -2
Ss18Q62280 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.54□□□□□ -2
Ss18Q62280 Gm23540-201ENSMUST00000157543 164 ntBASIC2.54□□□□□ -2
Ss18Q62280 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ss18Q62280 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ss18Q62280 Gm17075-201ENSMUST00000171924 670 ntBASIC2.54□□□□□ -2
Ss18Q62280 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.54□□□□□ -2
Ss18Q62280 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Ss18Q62280 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Ss18Q62280 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ss18Q62280 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ss18Q62280 Gm27025-201ENSMUST00000182392 942 ntBASIC2.54□□□□□ -2
Ss18Q62280 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC2.54□□□□□ -2
Ss18Q62280 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC2.54□□□□□ -2
Ss18Q62280 Gm37219-201ENSMUST00000192036 926 ntBASIC2.54□□□□□ -2
Ss18Q62280 Gm20162-201ENSMUST00000193629 871 ntBASIC2.54□□□□□ -2
Ss18Q62280 Gm17967-201ENSMUST00000195319 647 ntBASIC2.54□□□□□ -2
Ss18Q62280 Gm43345-201ENSMUST00000199484 269 ntBASIC2.54□□□□□ -2
Ss18Q62280 Gm34091-201ENSMUST00000200875 604 ntBASIC2.54□□□□□ -2
Ss18Q62280 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ss18Q62280 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.54□□□□□ -2
Ss18Q62280 Gm3189-201ENSMUST00000205595 832 ntBASIC2.54□□□□□ -2
Ss18Q62280 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC2.54□□□□□ -2
Ss18Q62280 Gm6842-201ENSMUST00000211361 390 ntBASIC2.54□□□□□ -2
Ss18Q62280 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC2.54□□□□□ -2
Ss18Q62280 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC2.54□□□□□ -2
Ss18Q62280 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.54□□□□□ -2
Ss18Q62280 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ss18Q62280 AC158981.3-201ENSMUST00000226844 1024 ntBASIC2.54□□□□□ -2
Ss18Q62280 AC140209.1-201ENSMUST00000227875 284 ntBASIC2.54□□□□□ -2
Ss18Q62280 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ss18Q62280 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
Ss18Q62280 AF357341-201ENSMUST00000083088 75 ntBASIC2.54□□□□□ -2
Ss18Q62280 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC2.54□□□□□ -2
Ss18Q62280 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ss18Q62280 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ss18Q62280 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ss18Q62280 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.54□□□□□ -2
Ss18Q62280 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ss18Q62280 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Ss18Q62280 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ss18Q62280 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ss18Q62280 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ss18Q62280 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ss18Q62280 Gm25420-201ENSMUST00000104216 127 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ss18Q62280 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ss18Q62280 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm9432-201ENSMUST00000117810 759 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm5762-201ENSMUST00000119204 258 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm14810-201ENSMUST00000121628 486 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm15038-201ENSMUST00000122144 296 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm23183-201ENSMUST00000122595 323 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC2.53□□□□□ -2
Ss18Q62280 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.53□□□□□ -2
Ss18Q62280 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.53□□□□□ -2
Ss18Q62280 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC2.53□□□□□ -2
Ss18Q62280 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ss18Q62280 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ss18Q62280 Mir6907-201ENSMUST00000183764 71 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC2.53□□□□□ -2
Ss18Q62280 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.53□□□□□ -2
Ss18Q62280 Gm37001-201ENSMUST00000193377 190 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm18429-201ENSMUST00000198707 421 ntBASIC2.53□□□□□ -2
Ss18Q62280 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ss18Q62280 Gm19244-201ENSMUST00000204340 253 ntBASIC2.53□□□□□ -2
Ss18Q62280 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.53□□□□□ -2
Ss18Q62280 Gm35405-201ENSMUST00000218754 400 ntBASIC2.53□□□□□ -2
Ss18Q62280 AC152946.2-201ENSMUST00000219071 337 ntBASIC2.53□□□□□ -2
Ss18Q62280 AC125539.1-202ENSMUST00000226449 670 ntBASIC2.53□□□□□ -2
Ss18Q62280 AC100733.1-201ENSMUST00000228494 407 ntBASIC2.53□□□□□ -2
Ss18Q62280 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ss18Q62280 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ss18Q62280 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ss18Q62280 Gm5185-201ENSMUST00000080271 619 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm26121-201ENSMUST00000083364 162 ntBASIC2.53□□□□□ -2
Ss18Q62280 Gm22864-201ENSMUST00000083950 130 ntBASIC2.53□□□□□ -2
Ss18Q62280 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ss18Q62280 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC2.53□□□□□ -2
Ss18Q62280 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ss18Q62280 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC2.53□□□□□ -2
Ss18Q62280 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.53□□□□□ -2.01
Ss18Q62280 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC2.52□□□□□ -2.01
Ss18Q62280 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Ss18Q62280 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ss18Q62280 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ss18Q62280 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC2.52□□□□□ -2.01
Ss18Q62280 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ss18Q62280 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ss18Q62280 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ss18Q62280 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC2.52□□□□□ -2.01
Ss18Q62280 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC2.52□□□□□ -2.01
Ss18Q62280 Gm42768-201ENSMUST00000197734 2897 ntBASIC2.52□□□□□ -2.01
Ss18Q62280 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ss18Q62280 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Ss18Q62280 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms