Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
Ift88Q61371 Gm11393-201ENSMUST00000118019 288 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Gm12852-201ENSMUST00000119478 719 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Gm13627-201ENSMUST00000119700 706 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Gm11321-201ENSMUST00000121257 902 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Gm12103-201ENSMUST00000121892 362 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 n-R5s207-201ENSMUST00000122497 118 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Gm20526-201ENSMUST00000173416 158 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Gm26194-201ENSMUST00000175036 71 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ift88Q61371 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.55□□□□□ -1.68
Ift88Q61371 Gm27568-201ENSMUST00000184220 99 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.55□□□□□ -1.68
Ift88Q61371 Gm44125-201ENSMUST00000203068 448 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.55□□□□□ -1.68
Ift88Q61371 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.55□□□□□ -1.68
Ift88Q61371 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.55□□□□□ -1.68
Ift88Q61371 AC109214.2-201ENSMUST00000220089 358 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Gm18026-201ENSMUST00000222789 727 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ift88Q61371 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ift88Q61371 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Ift88Q61371 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ift88Q61371 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ift88Q61371 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.55□□□□□ -1.68
Ift88Q61371 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ift88Q61371 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.55□□□□□ -1.68
Ift88Q61371 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Ift88Q61371 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm15025-201ENSMUST00000118434 418 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm11359-201ENSMUST00000120039 567 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm13973-201ENSMUST00000121371 894 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm24438-201ENSMUST00000157893 115 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm16589-201ENSMUST00000159522 918 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm3030-201ENSMUST00000163410 516 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm3851-201ENSMUST00000168653 318 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm18522-201ENSMUST00000173947 650 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm13249-201ENSMUST00000177803 345 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm13144-201ENSMUST00000179385 345 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm21960-201ENSMUST00000181924 452 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm27805-201ENSMUST00000184513 79 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm29299-201ENSMUST00000185609 923 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm29573-201ENSMUST00000190291 919 ntBASIC4.54□□□□□ -1.68
Ift88Q61371 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ift88Q61371 Gm20811-201ENSMUST00000190500 553 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms