Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CtcfQ61164 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CtcfQ61164 Gm23987-201ENSMUST00000117039 129 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CtcfQ61164 Gm13268-201ENSMUST00000117485 433 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm11718-201ENSMUST00000119942 537 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm15038-201ENSMUST00000122144 296 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm15075-201ENSMUST00000122187 477 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.41□□□□□ -1.7
CtcfQ61164 Gm18417-201ENSMUST00000176564 648 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm37771-201ENSMUST00000193121 265 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.41□□□□□ -1.7
CtcfQ61164 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.41□□□□□ -1.7
CtcfQ61164 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm19418-201ENSMUST00000197436 580 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC4.41□□□□□ -1.7
CtcfQ61164 Gm43708-201ENSMUST00000198857 961 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm7946-201ENSMUST00000203326 958 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.41□□□□□ -1.7
CtcfQ61164 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm18252-203ENSMUST00000215855 757 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.41□□□□□ -1.7
CtcfQ61164 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CtcfQ61164 AC152979.4-201ENSMUST00000219893 379 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm45965-201ENSMUST00000221192 1284 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.41□□□□□ -1.7
CtcfQ61164 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
CtcfQ61164 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CtcfQ61164 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CtcfQ61164 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CtcfQ61164 Gm23099-201ENSMUST00000083454 139 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CtcfQ61164 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CtcfQ61164 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CtcfQ61164 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.4□□□□□ -1.7
CtcfQ61164 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CtcfQ61164 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.4□□□□□ -1.7
CtcfQ61164 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CtcfQ61164 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.4□□□□□ -1.71
CtcfQ61164 Gm12173-201ENSMUST00000117622 273 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm14898-201ENSMUST00000120202 645 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC4.4□□□□□ -1.71
CtcfQ61164 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm24498-201ENSMUST00000158445 102 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm23702-201ENSMUST00000158840 130 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm8161-201ENSMUST00000168739 481 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CtcfQ61164 Gm26194-201ENSMUST00000175036 71 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm25748-201ENSMUST00000175487 70 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC4.4□□□□□ -1.71
CtcfQ61164 Mir7074-201ENSMUST00000183884 63 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm5368-201ENSMUST00000189012 589 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.4□□□□□ -1.71
CtcfQ61164 Gm29479-201ENSMUST00000190352 455 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CtcfQ61164 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm17887-201ENSMUST00000200194 547 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CtcfQ61164 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CtcfQ61164 Gm18602-201ENSMUST00000209794 851 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 CT025526.1-201ENSMUST00000217327 267 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.4□□□□□ -1.71
CtcfQ61164 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC4.4□□□□□ -1.71
CtcfQ61164 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CtcfQ61164 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CtcfQ61164 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CtcfQ61164 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CtcfQ61164 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CtcfQ61164 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.4□□□□□ -1.71
CtcfQ61164 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CtcfQ61164 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.4□□□□□ -1.71
CtcfQ61164 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CtcfQ61164 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm42701-201ENSMUST00000196117 1657 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Mir592-201ENSMUST00000102113 96 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CtcfQ61164 Mir208b-201ENSMUST00000104735 77 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm2348-201ENSMUST00000108782 300 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CtcfQ61164 Gm15176-201ENSMUST00000117734 135 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm11845-201ENSMUST00000117886 327 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm15659-201ENSMUST00000118881 341 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.39□□□□□ -1.71
CtcfQ61164 Gm14649-201ENSMUST00000121814 324 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms