Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.36□□□□□ -1.87
Usf1Q61069 Gm17935-201ENSMUST00000196649 772 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm9375-201ENSMUST00000208899 903 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm45327-201ENSMUST00000211612 565 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm5358-201ENSMUST00000212814 353 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.36□□□□□ -1.87
Usf1Q61069 Gm34005-201ENSMUST00000215834 282 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm21089-201ENSMUST00000215843 325 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.36□□□□□ -1.87
Usf1Q61069 Gm18441-201ENSMUST00000223539 617 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Usf1Q61069 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Usf1Q61069 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Usf1Q61069 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Usf1Q61069 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Usf1Q61069 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Usf1Q61069 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Usf1Q61069 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Usf1Q61069 Gm43216-201ENSMUST00000196295 1333 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
Usf1Q61069 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Usf1Q61069 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Gm15180-201ENSMUST00000117745 492 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Gm6274-201ENSMUST00000118173 797 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Usf1Q61069 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Gm14591-201ENSMUST00000120407 518 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Usf1Q61069 Gm26045-201ENSMUST00000157862 97 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Gm17177-201ENSMUST00000169144 483 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Mir7k-201ENSMUST00000184115 110 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.35□□□□□ -1.87
Usf1Q61069 Gm42474-201ENSMUST00000201073 505 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Gm18194-201ENSMUST00000210455 481 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 AC133654.1-201ENSMUST00000228411 672 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Usf1Q61069 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.35□□□□□ -1.87
Usf1Q61069 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Usf1Q61069 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Usf1Q61069 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Usf1Q61069 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Usf1Q61069 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Usf1Q61069 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Usf1Q61069 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Usf1Q61069 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Usf1Q61069 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Usf1Q61069 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Usf1Q61069 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Usf1Q61069 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm14890-201ENSMUST00000117660 676 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm2288-201ENSMUST00000118560 638 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm15126-201ENSMUST00000118631 833 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm13743-201ENSMUST00000121486 724 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm11575-201ENSMUST00000122243 228 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm14905-201ENSMUST00000122351 639 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.34□□□□□ -1.87
Usf1Q61069 Gm12226-201ENSMUST00000144172 876 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm25490-201ENSMUST00000158734 130 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm24875-201ENSMUST00000158888 104 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm16147-201ENSMUST00000162143 373 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Usf1Q61069 Gm20693-201ENSMUST00000177431 211 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm25944-201ENSMUST00000178758 94 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Mir7081-201ENSMUST00000184490 75 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm3454-201ENSMUST00000185571 412 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Usf1Q61069 Gm7182-201ENSMUST00000193351 732 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm38332-201ENSMUST00000194189 147 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm44371-201ENSMUST00000204148 467 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm44092-201ENSMUST00000204470 258 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm19726-201ENSMUST00000205008 240 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm44927-201ENSMUST00000207573 716 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Gm17917-201ENSMUST00000218561 953 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Usf1Q61069 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.34□□□□□ -1.87
Usf1Q61069 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Usf1Q61069 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Usf1Q61069 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Usf1Q61069 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Usf1Q61069 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.34□□□□□ -1.88
Usf1Q61069 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Usf1Q61069 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.34□□□□□ -1.88
Usf1Q61069 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
Usf1Q61069 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Usf1Q61069 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.33□□□□□ -1.88
Usf1Q61069 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms