Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm17421-201ENSMUST00000167845 674 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Mir3965-201ENSMUST00000175570 69 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm20773-201ENSMUST00000178940 681 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm45789-201ENSMUST00000213038 364 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Mir466k-201ENSMUST00000116774 122 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm26866-201ENSMUST00000180414 802 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm27762-201ENSMUST00000183417 109 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm42850-201ENSMUST00000202094 201 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm22979-201ENSMUST00000082609 159 ntBASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Mrgprb13-201ENSMUST00000188191 985 ntBASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm18921-201ENSMUST00000221798 366 ntBASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc88aQ5SNZ0 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm11456-201ENSMUST00000121070 256 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm25806-201ENSMUST00000122782 122 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm26041-201ENSMUST00000158148 108 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm7258-201ENSMUST00000179317 300 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm18445-201ENSMUST00000195502 774 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm6842-201ENSMUST00000211361 390 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm25099-201ENSMUST00000093716 116 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm22532-201ENSMUST00000158822 140 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm29610-201ENSMUST00000187749 453 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm44623-201ENSMUST00000207934 434 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm13717-201ENSMUST00000119868 365 ntBASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm11321-201ENSMUST00000121257 902 ntBASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm28002-201ENSMUST00000184832 100 ntBASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm28500-201ENSMUST00000190286 151 ntBASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr844-201ENSMUST00000054106 930 ntBASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Ccdc88aQ5SNZ0 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Ccdc88aQ5SNZ0 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Ccdc88aQ5SNZ0 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc88aQ5SNZ0 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.58□□□□□ -1.84
Ccdc88aQ5SNZ0 Gm15103-201ENSMUST00000119893 871 ntBASIC3.58□□□□□ -1.84
Ccdc88aQ5SNZ0 Gm7855-201ENSMUST00000137737 687 ntBASIC3.58□□□□□ -1.84
Ccdc88aQ5SNZ0 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms