Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm24532-201ENSMUST00000157951 286 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm24188-201ENSMUST00000157980 108 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm24850-201ENSMUST00000158029 119 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm23380-201ENSMUST00000158448 103 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm23476-201ENSMUST00000158881 274 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm16353-201ENSMUST00000159458 1223 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm8292-201ENSMUST00000162574 396 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm22177-201ENSMUST00000175002 158 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm24813-201ENSMUST00000175310 84 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm20773-201ENSMUST00000178940 681 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm8676-201ENSMUST00000184206 637 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm28647-201ENSMUST00000188416 197 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm18303-201ENSMUST00000190055 1176 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm20915-201ENSMUST00000191575 663 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Mir31-201ENSMUST00000083474 106 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 n-R5s13-201ENSMUST00000093707 119 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm26145-201ENSMUST00000104476 127 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm13913-201ENSMUST00000121126 260 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm23791-201ENSMUST00000122553 293 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm23867-201ENSMUST00000122649 274 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm15905-201ENSMUST00000137042 298 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm5963-201ENSMUST00000143451 236 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm5958-201ENSMUST00000147698 297 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm23167-201ENSMUST00000157155 103 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm24435-201ENSMUST00000157886 110 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm27783-201ENSMUST00000183534 105 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm21147-201ENSMUST00000186046 913 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm6060-201ENSMUST00000188671 251 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm18183-201ENSMUST00000191024 615 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm44757-201ENSMUST00000206373 157 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm17780-201ENSMUST00000207142 612 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 AC123835.1-201ENSMUST00000214362 670 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 AC147615.1-201ENSMUST00000218914 441 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm20368-201ENSMUST00000220716 301 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 AC154452.1-201ENSMUST00000225819 241 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Gm25199-201ENSMUST00000083095 104 ntBASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Trav3-1Q5R1I8 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Snora36b-201ENSMUST00000104383 132 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm15108-201ENSMUST00000116160 803 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm14163-201ENSMUST00000117342 217 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm11285-201ENSMUST00000118443 322 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm11869-201ENSMUST00000118701 329 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm9308-201ENSMUST00000119073 448 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm15231-201ENSMUST00000119174 447 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm15313-201ENSMUST00000119179 282 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm11481-201ENSMUST00000120069 255 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm15780-201ENSMUST00000121283 935 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm15111-201ENSMUST00000122142 878 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm16330-201ENSMUST00000128324 297 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm22561-201ENSMUST00000157331 84 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm24537-201ENSMUST00000157950 102 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm16102-201ENSMUST00000160955 420 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm5929-201ENSMUST00000166883 487 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm3307-201ENSMUST00000176164 632 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm26318-201ENSMUST00000176507 96 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Mir7220-201ENSMUST00000183978 60 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Mir6972-201ENSMUST00000184774 64 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 n-TStga1-201ENSMUST00000199903 109 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm42926-201ENSMUST00000200496 697 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms