Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Usp28Q5I043 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.6□□□□□ -1.83
Usp28Q5I043 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Usp28Q5I043 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Usp28Q5I043 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Usp28Q5I043 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Usp28Q5I043 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm26100-201ENSMUST00000157245 127 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm22059-201ENSMUST00000157544 104 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm23152-201ENSMUST00000175322 116 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm25817-201ENSMUST00000177758 121 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm24766-201ENSMUST00000179182 121 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm27155-201ENSMUST00000183716 898 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm42593-201ENSMUST00000198469 377 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm6590-201ENSMUST00000203343 687 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm44919-201ENSMUST00000208587 1073 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Usp28Q5I043 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC3.59□□□□□ -1.83
Usp28Q5I043 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Usp28Q5I043 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Diaph3-206ENSMUST00000226745 713 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Usp28Q5I043 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.59□□□□□ -1.83
Usp28Q5I043 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Usp28Q5I043 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.59□□□□□ -1.84
Usp28Q5I043 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.59□□□□□ -1.84
Usp28Q5I043 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Usp28Q5I043 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Usp28Q5I043 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Usp28Q5I043 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Usp28Q5I043 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm24273-201ENSMUST00000102332 164 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm14037-201ENSMUST00000120576 313 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm11797-201ENSMUST00000121336 754 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm12313-201ENSMUST00000121347 421 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm24505-201ENSMUST00000157682 126 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm24745-201ENSMUST00000157840 85 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm25606-201ENSMUST00000158363 95 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm6486-201ENSMUST00000166202 434 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm18406-201ENSMUST00000185872 669 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Mir1892-201ENSMUST00000197752 80 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm43345-201ENSMUST00000199484 269 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.58□□□□□ -1.84
Usp28Q5I043 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm18039-201ENSMUST00000217816 728 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 AC167202.1-201ENSMUST00000219027 331 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Usp28Q5I043 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.58□□□□□ -1.84
Usp28Q5I043 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Usp28Q5I043 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
Usp28Q5I043 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Usp28Q5I043 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm14541-201ENSMUST00000118985 157 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm14119-201ENSMUST00000119511 235 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.57□□□□□ -1.84
Usp28Q5I043 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm24008-201ENSMUST00000157733 138 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm22789-201ENSMUST00000157884 130 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm25835-201ENSMUST00000158917 144 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Usp28Q5I043 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Usp28Q5I043 Mir1264-201ENSMUST00000175381 86 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm27893-201ENSMUST00000184408 194 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.57□□□□□ -1.84
Usp28Q5I043 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm36954-201ENSMUST00000195362 363 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm45034-201ENSMUST00000206831 482 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Usp28Q5I043 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm7034-201ENSMUST00000218638 645 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.57□□□□□ -1.84
Usp28Q5I043 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Gm7204-201ENSMUST00000062591 600 ntBASIC3.57□□□□□ -1.84
Usp28Q5I043 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms