Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 Gm37928-201ENSMUST00000193265 4131 ntBASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 Gm26387-201ENSMUST00000104238 132 ntBASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 Gm15733-201ENSMUST00000132957 242 ntBASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 Gm26028-201ENSMUST00000158660 294 ntBASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 Gm4761-201ENSMUST00000178086 582 ntBASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 Mir6401-201ENSMUST00000184499 109 ntBASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 Gm18617-201ENSMUST00000222311 259 ntBASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 CT025579.1-201ENSMUST00000223779 366 ntBASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 Gm26121-201ENSMUST00000083364 162 ntBASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ccdc88bQ4QRL3 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc88bQ4QRL3 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc88bQ4QRL3 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc88bQ4QRL3 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc88bQ4QRL3 Mir499-201ENSMUST00000102357 79 ntBASIC4.92□□□□□ -1.62
Ccdc88bQ4QRL3 Gm14065-201ENSMUST00000120848 585 ntBASIC4.92□□□□□ -1.62
Ccdc88bQ4QRL3 Gm24816-201ENSMUST00000175311 151 ntBASIC4.92□□□□□ -1.62
Ccdc88bQ4QRL3 Gm38041-201ENSMUST00000194445 661 ntBASIC4.92□□□□□ -1.62
Ccdc88bQ4QRL3 Olfr192-201ENSMUST00000080251 925 ntBASIC4.92□□□□□ -1.62
Ccdc88bQ4QRL3 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ccdc88bQ4QRL3 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ccdc88bQ4QRL3 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.91□□□□□ -1.62
Ccdc88bQ4QRL3 Gm44675-201ENSMUST00000208188 2927 ntBASIC4.91□□□□□ -1.62
Ccdc88bQ4QRL3 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc88bQ4QRL3 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ccdc88bQ4QRL3 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ccdc88bQ4QRL3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.91□□□□□ -1.62
Ccdc88bQ4QRL3 Ighv1-41-201ENSMUST00000194414 329 ntBASIC4.91□□□□□ -1.62
Ccdc88bQ4QRL3 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC4.91□□□□□ -1.62
Ccdc88bQ4QRL3 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ccdc88bQ4QRL3 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ccdc88bQ4QRL3 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ccdc88bQ4QRL3 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Ccdc88bQ4QRL3 Gm22500-201ENSMUST00000158982 99 ntBASIC4.9□□□□□ -1.62
Ccdc88bQ4QRL3 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Ccdc88bQ4QRL3 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.9□□□□□ -1.62
Ccdc88bQ4QRL3 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.9□□□□□ -1.62
Ccdc88bQ4QRL3 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.9□□□□□ -1.62
Ccdc88bQ4QRL3 AC159188.1-201ENSMUST00000225198 526 ntBASIC4.9□□□□□ -1.62
Ccdc88bQ4QRL3 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
Ccdc88bQ4QRL3 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Ccdc88bQ4QRL3 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
Ccdc88bQ4QRL3 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc88bQ4QRL3 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.9□□□□□ -1.63
Ccdc88bQ4QRL3 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ccdc88bQ4QRL3 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 Gm15094-201ENSMUST00000118394 1131 ntBASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 Gm15103-201ENSMUST00000119893 871 ntBASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 Gm12723-201ENSMUST00000120700 451 ntBASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 Gm18984-201ENSMUST00000193998 1124 ntBASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 Gm18748-201ENSMUST00000198507 622 ntBASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 Gm43478-201ENSMUST00000200381 292 ntBASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 Gm18997-201ENSMUST00000216353 822 ntBASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.89□□□□□ -1.63
Ccdc88bQ4QRL3 Gm11414-201ENSMUST00000121795 263 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm20612-201ENSMUST00000176318 236 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm19418-201ENSMUST00000197436 580 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm43368-201ENSMUST00000200638 409 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm45257-201ENSMUST00000210301 3998 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm25466-201ENSMUST00000103995 132 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm26341-201ENSMUST00000104561 134 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm14943-201ENSMUST00000118056 546 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 DQ267100-201ENSMUST00000122600 72 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm28628-201ENSMUST00000187006 264 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm28629-201ENSMUST00000187309 263 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Ighv8-1-201ENSMUST00000194897 291 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Gm43601-201ENSMUST00000196294 945 ntBASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc88bQ4QRL3 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc88bQ4QRL3 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms