Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm14932-201ENSMUST00000117112 453 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm11566-201ENSMUST00000118550 203 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm11931-201ENSMUST00000121630 447 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm13852-201ENSMUST00000122350 242 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm9785-202ENSMUST00000144563 593 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm22219-201ENSMUST00000157562 319 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm23754-201ENSMUST00000157576 63 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm23034-201ENSMUST00000158001 147 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm2862-201ENSMUST00000161524 328 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm16285-201ENSMUST00000162999 347 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Mir6410-201ENSMUST00000184204 104 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm37836-201ENSMUST00000195875 175 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm8745-201ENSMUST00000207846 782 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm46327-201ENSMUST00000218240 365 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm23518-201ENSMUST00000082835 153 ntBASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim40Q3UWA4 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm15110-201ENSMUST00000117545 881 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm14142-201ENSMUST00000117833 296 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm6584-201ENSMUST00000119671 447 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm14238-201ENSMUST00000120227 323 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm14577-201ENSMUST00000121134 256 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm23782-201ENSMUST00000157939 120 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm25655-201ENSMUST00000158465 290 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm20648-201ENSMUST00000175815 328 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm43704-201ENSMUST00000196164 496 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm42438-201ENSMUST00000197832 974 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm44871-201ENSMUST00000207821 497 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm18194-201ENSMUST00000210455 481 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm8249-201ENSMUST00000219225 465 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm8274-201ENSMUST00000219820 463 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm9818-201ENSMUST00000050900 255 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm23099-201ENSMUST00000083454 139 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm22864-201ENSMUST00000083950 130 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim40Q3UWA4 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.52□□□□□ -1.85
Trim40Q3UWA4 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms